Difference between revisions of "TSS:Mm 101074.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=-28681 |end=11657262 |entrez_id=22778 |gc_percent=0.517413 |gene_alias=5832432G11Rik|Ikaros|LyF-1|Zfpn1a1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Ikaros= | ||
| + | |LyF-1= | ||
| + | |Zfpn1a1= | ||
| + | |Znfn1a1= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 5: | Line 9: | ||
|distance_to_tss=-28681 | |distance_to_tss=-28681 | ||
|end=11657262 | |end=11657262 | ||
| + | |end_of_center_position=11657245 | ||
|entrez_id=22778 | |entrez_id=22778 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=5832432G11Rik | + | |gene_alias=5832432G11Rik |
|gene_description=IKAROS family zinc finger 1 | |gene_description=IKAROS family zinc finger 1 | ||
|gene_name=Ikzf1 | |gene_name=Ikzf1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hlk-1= | ||
| + | |mKIAA4227= | ||
|nearest_ensembl=ENSMUSG00000018654 | |nearest_ensembl=ENSMUSG00000018654 | ||
|nearest_promoter_id=NM_009578 | |nearest_promoter_id=NM_009578 | ||
| Line 18: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=11657226 | |start=11657226 | ||
| + | |start_of_center_position=11657244 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Revision as of 21:25, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11657244 |
|---|---|
| End of the center position in the TSS region: | 11657245 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -28681 |
|---|---|
| Nearest PromoterID: | NM_009578 |
| Entrez ID: | 22778 |
| Nearest Unigene: | Mm.103545 |
| Nearest Refseq: | NM_009578 |
| Nearest Ensembl: | ENSMUSG00000018654 |
| Gene Name: | Ikzf1 |
| Gene Alias: | 5832432G11Rik |
| Gene Description: | IKAROS family zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
