Difference between revisions of "TSS:Mm 101097.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF012881:-325 ENSMUST00000066237.9:-336 BC089594:-378 BC060989:-392 ENSMUST00000178704.7:-436 NM_001190448:-436 uc007iax.2:-436 |chr=chr11 |cpg_percent=...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=439 | |distance_to_tss=439 | ||
|end=11897708 | |end=11897708 | ||
| + | |end_of_center_position=11897705 | ||
|entrez_id=13195 | |entrez_id=13195 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=11897701 | |start=11897701 | ||
| + | |start_of_center_position=11897704 | ||
|strand=- | |strand=- | ||
|tata_box="64(GTTTTAATAGAA,+,0.00)" | |tata_box="64(GTTTTAATAGAA,+,0.00)" | ||
Revision as of 21:31, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11897704 |
|---|---|
| End of the center position in the TSS region: | 11897705 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF012881 |
|---|---|
| Distance: | -325 |
| Num_trans: | 7 |
| All_trans: | AF012881:-325 ENSMUST00000066237.9:-336 BC089594:-378 BC060989:-392 ENSMUST00000178704.7:-436 NM_001190448:-436 uc007iax.2:-436 |
TATA-Box annotation
| Distance to TSS: | 439 |
|---|---|
| Nearest PromoterID: | NM_001190448 |
| Entrez ID: | 13195 |
| Nearest Unigene: | Mm.12906 |
| Nearest Refseq: | NM_016672 |
| Nearest Ensembl: | ENSMUSG00000020182 |
| Gene Name: | dopa decarboxylase |
| Gene Alias: | Aadc |
| Gene Description: | dopa decarboxylase |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "64(GTTTTAATAGAA,+,0.00)" |
