Difference between revisions of "TSS:Mm 101124.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK030727:0 BC053842:-27 AF022072:-32 AK163841:-39 AK012646:-39 ENSMUST00000093321.11:-41 AK032927:-41 NM_010345:-60 uc007iba.2:-60 uc007ibb.2:-60 FJ4258...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AI325020= | ||
| + | |Meg1= | ||
|all_trans=AK030727:0 BC053842:-27 AF022072:-32 AK163841:-39 AK012646:-39 ENSMUST00000093321.11:-41 AK032927:-41 NM_010345:-60 uc007iba.2:-60 uc007ibb.2:-60 FJ425892:-67 | |all_trans=AK030727:0 BC053842:-27 AF022072:-32 AK163841:-39 AK012646:-39 ENSMUST00000093321.11:-41 AK032927:-41 NM_010345:-60 uc007iba.2:-60 uc007ibb.2:-60 FJ425892:-67 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=65 | |distance_to_tss=65 | ||
|end=12037360 | |end=12037360 | ||
| + | |end_of_center_position=12037355 | ||
|entrez_id=14783 | |entrez_id=14783 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=5730571D09Rik | + | |gene_alias=5730571D09Rik |
|gene_description=growth factor receptor bound protein 10 | |gene_description=growth factor receptor bound protein 10 | ||
|gene_id=14783 | |gene_id=14783 | ||
| Line 17: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:103232 | |hgnc_mgi_id=MGI:103232 | ||
| + | |mKIAA0207= | ||
|nearest_ensembl=ENSMUSG00000020176 | |nearest_ensembl=ENSMUSG00000020176 | ||
|nearest_promoter_id=NM_010345 | |nearest_promoter_id=NM_010345 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=12037349 | |start=12037349 | ||
| + | |start_of_center_position=12037354 | ||
|strand=- | |strand=- | ||
|transcript_name=AK030727 | |transcript_name=AK030727 | ||
Revision as of 21:33, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12037354 |
|---|---|
| End of the center position in the TSS region: | 12037355 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK030727 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | AK030727:0 BC053842:-27 AF022072:-32 AK163841:-39 AK012646:-39 ENSMUST00000093321.11:-41 AK032927:-41 NM_010345:-60 uc007iba.2:-60 uc007ibb.2:-60 FJ425892:-67 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NM_010345 |
| Entrez ID: | 14783 |
| Nearest Unigene: | Mm.273117 |
| Nearest Refseq: | NM_010345 |
| Nearest Ensembl: | ENSMUSG00000020176 |
| Gene Name: | growth factor receptor bound protein 10 |
| Gene Alias: | 5730571D09Rik |
| Gene Description: | growth factor receptor bound protein 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
