Difference between revisions of "TSS:Mm 101143.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000138695.1:0 AK012393:0 AK160390:0 AK012644:-8 BC019129:-12 BC019158:-12 ENSMUST00000109642.7:-27 ENSMUST00000109641.1:30 ENSMUST00000109643.7...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=365 | |distance_to_tss=365 | ||
|end=16508139 | |end=16508139 | ||
| + | |end_of_center_position=16508119 | ||
|entrez_id=20335 | |entrez_id=20335 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=16508098 | |start=16508098 | ||
| + | |start_of_center_position=16508118 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000138695.1 AK012393 AK160390 | |transcript_name=ENSMUST00000138695.1 AK012393 AK160390 | ||
Revision as of 21:37, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16508118 |
|---|---|
| End of the center position in the TSS region: | 16508119 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000138695.1 AK012393 AK160390 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000138695.1:0 AK012393:0 AK160390:0 AK012644:-8 BC019129:-12 BC019158:-12 ENSMUST00000109642.7:-27 ENSMUST00000109641.1:30 ENSMUST00000109643.7:-345 ENSMUST00000166950.7:-345 ENSMUST00000178855.7:-345 NM_001109972:-345 NM_001109971:-345 NM_011343:-345 uc007ibl.2:-345 uc007ibm.2:-345 uc011xrs.1:-345 |
TATA-Box annotation
| Distance to TSS: | 365 |
|---|---|
| Nearest PromoterID: | NM_011343 |
| Entrez ID: | 20335 |
| Nearest Unigene: | Mm.325350 |
| Nearest Refseq: | NM_011343 |
| Nearest Ensembl: | ENSMUSG00000078974 |
| Gene Name: | "SEC61, gamma subunit" |
| Gene Alias: | - |
| Gene Description: | "SEC61, gamma subunit" |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
