Difference between revisions of "TSS:Mm 101145.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109643.7:4 ENSMUST00000166950.7:4 ENSMUST00000178855.7:4 NM_001109972:4 NM_001109971:4 NM_011343:4 uc007ibl.2:4 uc007ibm.2:4 uc011xrs.1:4 EN...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-13 | |distance_to_tss=-13 | ||
|end=16508507 | |end=16508507 | ||
| + | |end_of_center_position=16508498 | ||
|entrez_id=20335 | |entrez_id=20335 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=16508487 | |start=16508487 | ||
| + | |start_of_center_position=16508497 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109643.7 ENSMUST00000166950.7 ENSMUST00000178855.7 NM_001109972 NM_001109971 NM_011343 uc007ibl.2 uc007ibm.2 uc011xrs.1 | |transcript_name=ENSMUST00000109643.7 ENSMUST00000166950.7 ENSMUST00000178855.7 NM_001109972 NM_001109971 NM_011343 uc007ibl.2 uc007ibm.2 uc011xrs.1 | ||
Revision as of 21:37, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 16508497 |
|---|---|
| End of the center position in the TSS region: | 16508498 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109643.7 ENSMUST00000166950.7 ENSMUST00000178855.7 NM_001109972 NM_001109971 NM_011343 uc007ibl.2 uc007ibm.2 uc011xrs.1 |
|---|---|
| Distance: | 4 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000109643.7:4 ENSMUST00000166950.7:4 ENSMUST00000178855.7:4 NM_001109972:4 NM_001109971:4 NM_011343:4 uc007ibl.2:4 uc007ibm.2:4 uc011xrs.1:4 ENSMUST00000109642.7:322 BC019129:337 BC019158:337 AK012644:341 ENSMUST00000138695.1:356 AK160390:364 AK012393:387 ENSMUST00000109641.1:419 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_001109971 |
| Entrez ID: | 20335 |
| Nearest Unigene: | Mm.325350 |
| Nearest Refseq: | NM_011343 |
| Nearest Ensembl: | ENSMUSG00000078974 |
| Gene Name: | "SEC61, gamma subunit" |
| Gene Alias: | - |
| Gene Description: | "SEC61, gamma subunit" |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
