Difference between revisions of "TSS:Mm 101159.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF181830:491 |chr=chr11 |cpg_percent=0.005 |distance=491 |distance_to_tss=21489 |end=16972919 |entrez_id=319701 |gc_percent=0.338308 |gene_alias=A630050...") |
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|distance_to_tss=21489 | |distance_to_tss=21489 | ||
|end=16972919 | |end=16972919 | ||
| + | |end_of_center_position=16972900 | ||
|entrez_id=319701 | |entrez_id=319701 | ||
|gc_percent=0.338308 | |gc_percent=0.338308 | ||
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|species=mouse | |species=mouse | ||
|start=16972879 | |start=16972879 | ||
| + | |start_of_center_position=16972899 | ||
|strand=- | |strand=- | ||
|tata_box="-5(CTATTTATAGAC,+,0.00)" | |tata_box="-5(CTATTTATAGAC,+,0.00)" | ||
Revision as of 21:41, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 16972899 |
|---|---|
| End of the center position in the TSS region: | 16972900 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF181830 |
|---|---|
| Distance: | 491 |
| Num_trans: | 1 |
| All_trans: | AF181830:491 |
TATA-Box annotation
| Distance to TSS: | 21489 |
|---|---|
| Nearest PromoterID: | NM_176982 |
| Entrez ID: | 319701 |
| Nearest Unigene: | Mm.120672 |
| Nearest Refseq: | NM_176982 |
| Nearest Ensembl: | ENSMUSG00000044966 |
| Gene Name: | pleckstrin |
| Gene Alias: | A630050E13Rik |
| Gene Description: | F-box protein 48 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.338308 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-5(CTATTTATAGAC,+,0.00)" |
