Difference between revisions of "TSS:Mm 101186.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000121971.1:49 |chr=chr11 |cpg_percent=0.03 |distance=49 |distance_to_tss=43764 |end=17095703 |entrez_id=380686 |gc_percent=0.412935 |gene_alia...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |3110054C06Rik= | ||
| + | |5330437A18Rik= | ||
| + | |AI854501= | ||
| + | |C2orf32= | ||
|all_trans=ENSMUST00000121971.1:49 | |all_trans=ENSMUST00000121971.1:49 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=43764 | |distance_to_tss=43764 | ||
|end=17095703 | |end=17095703 | ||
| + | |end_of_center_position=17095698 | ||
|entrez_id=380686 | |entrez_id=380686 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=1500041B16Rik | + | |gene_alias=1500041B16Rik |
|gene_description=cannabinoid receptor interacting protein 1 | |gene_description=cannabinoid receptor interacting protein 1 | ||
|gene_id= | |gene_id= | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=17095692 | |start=17095692 | ||
| + | |start_of_center_position=17095697 | ||
|strand=- | |strand=- | ||
|tata_box="-47(GACTTTAAGAAG,-,0.00),-24(CTCCTTTAAAGA,-,0.00)" | |tata_box="-47(GACTTTAAGAAG,-,0.00),-24(CTCCTTTAAAGA,-,0.00)" | ||
Revision as of 21:44, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17095697 |
|---|---|
| End of the center position in the TSS region: | 17095698 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000121971.1 |
|---|---|
| Distance: | 49 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000121971.1:49 |
TATA-Box annotation
| Distance to TSS: | 43764 |
|---|---|
| Nearest PromoterID: | NM_029861 |
| Entrez ID: | 380686 |
| Nearest Unigene: | Mm.425666 |
| Nearest Refseq: | NM_029861 |
| Nearest Ensembl: | ENSMUSG00000044629 |
| Gene Name: | predicted gene 12013 |
| Gene Alias: | 1500041B16Rik |
| Gene Description: | cannabinoid receptor interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-47(GACTTTAAGAAG,-,0.00),-24(CTCCTTTAAAGA,-,0.00)" |
