Difference between revisions of "TSS:Mm 101189.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_025443:0 uc007icc.1:0 AK146152:0 AK168177:0 ENSMUST00000020317.7:9 AF349950:9 BC020037:17 AK009896:18 AK017153:18 AK009146:22 AK007324:24 AK165942:28...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA407421= | ||
| + | |AU015468= | ||
| + | |AU019495= | ||
| + | |AU042323= | ||
| + | |Emi3= | ||
| + | |Imi3= | ||
|all_trans=NM_025443:0 uc007icc.1:0 AK146152:0 AK168177:0 ENSMUST00000020317.7:9 AF349950:9 BC020037:17 AK009896:18 AK017153:18 AK009146:22 AK007324:24 AK165942:28 AK205314:249 | |all_trans=NM_025443:0 uc007icc.1:0 AK146152:0 AK168177:0 ENSMUST00000020317.7:9 AF349950:9 BC020037:17 AK009896:18 AK017153:18 AK009146:22 AK007324:24 AK165942:28 AK205314:249 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=6 | |distance_to_tss=6 | ||
|end=17211590 | |end=17211590 | ||
| + | |end_of_center_position=17211584 | ||
|entrez_id=66249 | |entrez_id=66249 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=1810003N24Rik | + | |gene_alias=1810003N24Rik |
|gene_description=partner of NOB1 homolog | |gene_description=partner of NOB1 homolog | ||
|gene_id=66249 | |gene_id=66249 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=17211576 | |start=17211576 | ||
| + | |start_of_center_position=17211583 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_025443 uc007icc.1 AK146152 AK168177 | |transcript_name=NM_025443 uc007icc.1 AK146152 AK168177 | ||
Revision as of 21:44, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 17211583 |
|---|---|
| End of the center position in the TSS region: | 17211584 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_025443 uc007icc.1 AK146152 AK168177 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | NM_025443:0 uc007icc.1:0 AK146152:0 AK168177:0 ENSMUST00000020317.7:9 AF349950:9 BC020037:17 AK009896:18 AK017153:18 AK009146:22 AK007324:24 AK165942:28 AK205314:249 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_025443 |
| Entrez ID: | 66249 |
| Nearest Unigene: | Mm.27831 |
| Nearest Refseq: | NM_025443 |
| Nearest Ensembl: | ENSMUSG00000020116 |
| Gene Name: | partner of NOB1 homolog |
| Gene Alias: | 1810003N24Rik |
| Gene Description: | partner of NOB1 homolog |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
