Difference between revisions of "TSS:Mm 101197.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.025 |distance= |distance_to_tss=3848 |end=19015123 |entrez_id=17268 |gc_percent=0.422886 |gene_alias=C530044H18Rik|Evi8 |gene_description...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Evi8= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=3848 | |distance_to_tss=3848 | ||
|end=19015123 | |end=19015123 | ||
| + | |end_of_center_position=19015122 | ||
|entrez_id=17268 | |entrez_id=17268 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=C530044H18Rik | + | |gene_alias=C530044H18Rik |
|gene_description=Meis homeobox 1 | |gene_description=Meis homeobox 1 | ||
|gene_name=Meis1 | |gene_name=Meis1 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=19015119 | |start=19015119 | ||
| + | |start_of_center_position=19015121 | ||
|strand=- | |strand=- | ||
|tata_box="-35(GAGCATTAAAAG,-,0.00),-33(GCATTAAAAGTC,+,0.00),27(CCTTTTAGATGC,+,0.00)" | |tata_box="-35(GAGCATTAAAAG,-,0.00),-33(GCATTAAAAGTC,+,0.00),27(CCTTTTAGATGC,+,0.00)" | ||
Revision as of 21:47, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 19015121 |
|---|---|
| End of the center position in the TSS region: | 19015122 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 3848 |
|---|---|
| Nearest PromoterID: | NM_001193271 |
| Entrez ID: | 17268 |
| Nearest Unigene: | Mm.356578 |
| Nearest Refseq: | NM_010789 |
| Nearest Ensembl: | ENSMUSG00000020160 |
| Gene Name: | Meis1 |
| Gene Alias: | C530044H18Rik |
| Gene Description: | Meis homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GAGCATTAAAAG,-,0.00),-33(GCATTAAAAGTC,+,0.00),27(CCTTTTAGATGC,+,0.00)" |
