Difference between revisions of "TSS:Mm 101222.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.02 |distance= |distance_to_tss=-795 |end=20200809 |entrez_id=19324 |gc_percent=0.447761 |gene_alias=Gtbp|Rab-1|Rab1|Ypt1|mKIAA3012 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Rab-1= | ||
| + | |Rab1= | ||
| + | |Ypt1= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 5: | Line 8: | ||
|distance_to_tss=-795 | |distance_to_tss=-795 | ||
|end=20200809 | |end=20200809 | ||
| + | |end_of_center_position=20200808 | ||
|entrez_id=19324 | |entrez_id=19324 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=Gtbp | + | |gene_alias=Gtbp |
|gene_description="RAB1A, member RAS oncogene family" | |gene_description="RAB1A, member RAS oncogene family" | ||
|gene_name=Rab1a | |gene_name=Rab1a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA3012= | ||
|nearest_ensembl=ENSMUSG00000020149 | |nearest_ensembl=ENSMUSG00000020149 | ||
|nearest_promoter_id=NM_008996 | |nearest_promoter_id=NM_008996 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=20200805 | |start=20200805 | ||
| + | |start_of_center_position=20200807 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Revision as of 21:51, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 20200807 |
|---|---|
| End of the center position in the TSS region: | 20200808 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -795 |
|---|---|
| Nearest PromoterID: | NM_008996 |
| Entrez ID: | 19324 |
| Nearest Unigene: | Mm.271944 |
| Nearest Refseq: | NM_008996 |
| Nearest Ensembl: | ENSMUSG00000020149 |
| Gene Name: | Rab1a |
| Gene Alias: | Gtbp |
| Gene Description: | "RAB1A, member RAS oncogene family" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
