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Difference between revisions of "TSS:Mm 101226.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000050611.13:0 ENSMUST00000109596.7:0 ENSMUST00000162811.1:0 ENSMUST00000161218.1:0 NM_172260:0 uc007icw.1:0 uc007icy.1:0 uc007icz.1:0 uc007ida...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|AI481761=
 +
|BC027174=
 +
|Kiaa0582=
 
|all_trans=ENSMUST00000050611.13:0 ENSMUST00000109596.7:0 ENSMUST00000162811.1:0 ENSMUST00000161218.1:0 NM_172260:0 uc007icw.1:0 uc007icy.1:0 uc007icz.1:0 uc007ida.1:0 AK140820:0 AK031622:0 BC027174:0 AK146669:0 AK145286:0 AK169934:0 AK162594:0 AK172304:0 BC059935:0 AK172975:6 AK205251:41
 
|all_trans=ENSMUST00000050611.13:0 ENSMUST00000109596.7:0 ENSMUST00000162811.1:0 ENSMUST00000161218.1:0 NM_172260:0 uc007icw.1:0 uc007icy.1:0 uc007icz.1:0 uc007ida.1:0 AK140820:0 AK031622:0 BC027174:0 AK146669:0 AK145286:0 AK169934:0 AK162594:0 AK172304:0 BC059935:0 AK172975:6 AK205251:41
 
|chr=chr11
 
|chr=chr11
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|distance_to_tss=27
 
|distance_to_tss=27
 
|end=20249433
 
|end=20249433
 +
|end_of_center_position=20249397
 
|entrez_id=216543
 
|entrez_id=216543
 
|gc_percent=0.726368
 
|gc_percent=0.726368
|gene_alias=6030463E10Rik|AI481761|BC027174|Kiaa0582
+
|gene_alias=6030463E10Rik
 
|gene_description=centrosomal protein 68
 
|gene_description=centrosomal protein 68
 
|gene_id=216543
 
|gene_id=216543
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|species=mouse
 
|species=mouse
 
|start=20249360
 
|start=20249360
 +
|start_of_center_position=20249396
 
|strand=-
 
|strand=-
 
|transcript_name=ENSMUST00000050611.13 ENSMUST00000109596.7 ENSMUST00000162811.1 ENSMUST00000161218.1 NM_172260 uc007icw.1 uc007icy.1 uc007icz.1 uc007ida.1 AK140820 AK031622 BC027174 AK146669 AK145286 AK169934 AK162594 AK172304 BC059935
 
|transcript_name=ENSMUST00000050611.13 ENSMUST00000109596.7 ENSMUST00000162811.1 ENSMUST00000161218.1 NM_172260 uc007icw.1 uc007icy.1 uc007icz.1 uc007ida.1 AK140820 AK031622 BC027174 AK146669 AK145286 AK169934 AK162594 AK172304 BC059935

Revision as of 21:53, 11 May 2019

Basic information about the TSS


TSS ID:mm_101226.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:20249360
End:20249433
Strand:-
TSS Score:1
Start of the center position in the TSS region:20249396
End of the center position in the TSS region:20249397



Gene and protein annotation


Transcript_name:ENSMUST00000050611.13 ENSMUST00000109596.7 ENSMUST00000162811.1 ENSMUST00000161218.1 NM_172260 uc007icw.1 uc007icy.1 uc007icz.1 uc007ida.1 AK140820 AK031622 BC027174 AK146669 AK145286 AK169934 AK162594 AK172304 BC059935
Distance:0
GeneID:216543
HGNC/MGI_ID:MGI:2667663
UniProt_ID:Q3T9T3 Q3TRP8 Q3ULV4 Q8C0D9 Q8C0D9-2
Gene_name:centrosomal protein 68
Gene_symbol:Cep68
Gene_synonyms:6030463E10Rik
Gene_source:MGI:2667663



Transcript annotation


Transcript_name:ENSMUST00000050611.13 ENSMUST00000109596.7 ENSMUST00000162811.1 ENSMUST00000161218.1 NM_172260 uc007icw.1 uc007icy.1 uc007icz.1 uc007ida.1 AK140820 AK031622 BC027174 AK146669 AK145286 AK169934 AK162594 AK172304 BC059935
Distance:0
Num_trans:20
All_trans:ENSMUST00000050611.13:0 ENSMUST00000109596.7:0 ENSMUST00000162811.1:0 ENSMUST00000161218.1:0 NM_172260:0 uc007icw.1:0 uc007icy.1:0 uc007icz.1:0 uc007ida.1:0 AK140820:0 AK031622:0 BC027174:0 AK146669:0 AK145286:0 AK169934:0 AK162594:0 AK172304:0 BC059935:0 AK172975:6 AK205251:41



TATA-Box annotation


Distance to TSS:27
Nearest PromoterID:NM_172260
Entrez ID:216543
Nearest Unigene:Mm.260314
Nearest Refseq:NM_172260
Nearest Ensembl:ENSMUSG00000044066
Gene Name:centrosomal protein 68
Gene Alias:6030463E10Rik
Gene Description:centrosomal protein 68
Gene Type:protein-coding
CpG%:0.125
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):