Difference between revisions of "TSS:Mm 101230.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=U75215:0 BC052733:0 BC043483:-68 ENSMUST00000004634.6:-81 AK044280:-81 AF246129:99 AK148075:-109 AK136900:-109 ENSMUST00000109594.7:-110 NM_018861:-110...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ASCT1= | ||
| + | |AW045657= | ||
| + | |SATT= | ||
|all_trans=U75215:0 BC052733:0 BC043483:-68 ENSMUST00000004634.6:-81 AK044280:-81 AF246129:99 AK148075:-109 AK136900:-109 ENSMUST00000109594.7:-110 NM_018861:-110 uc007idb.2:-110 AK140866:-110 AK139248:-110 | |all_trans=U75215:0 BC052733:0 BC043483:-68 ENSMUST00000004634.6:-81 AK044280:-81 AF246129:99 AK148075:-109 AK136900:-109 ENSMUST00000109594.7:-110 NM_018861:-110 uc007idb.2:-110 AK140866:-110 AK139248:-110 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=126 | |distance_to_tss=126 | ||
|end=20332603 | |end=20332603 | ||
| + | |end_of_center_position=20332587 | ||
|entrez_id=55963 | |entrez_id=55963 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=ASCT-1 | + | |gene_alias=ASCT-1 |
|gene_description="solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" | |gene_description="solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" | ||
|gene_id=55963 | |gene_id=55963 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=20332570 | |start=20332570 | ||
| + | |start_of_center_position=20332586 | ||
|strand=- | |strand=- | ||
|transcript_name=U75215 BC052733 | |transcript_name=U75215 BC052733 | ||
Revision as of 21:53, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20332586 |
|---|---|
| End of the center position in the TSS region: | 20332587 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | U75215 BC052733 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | U75215:0 BC052733:0 BC043483:-68 ENSMUST00000004634.6:-81 AK044280:-81 AF246129:99 AK148075:-109 AK136900:-109 ENSMUST00000109594.7:-110 NM_018861:-110 uc007idb.2:-110 AK140866:-110 AK139248:-110 |
TATA-Box annotation
| Distance to TSS: | 126 |
|---|---|
| Nearest PromoterID: | NM_018861 |
| Entrez ID: | 55963 |
| Nearest Unigene: | Mm.6379 |
| Nearest Refseq: | NM_018861 |
| Nearest Ensembl: | ENSMUSG00000020142 |
| Gene Name: | "solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" |
| Gene Alias: | ASCT-1 |
| Gene Description: | "solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
