Difference between revisions of "TSS:Mm 101232.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ASCT1= | ||
| + | |AW045657= | ||
| + | |SATT= | ||
|all_trans=ENSMUST00000109594.7:0 NM_018861:0 uc007idb.2:0 AK140866:0 AK148075:0 AK136900:0 AK139248:0 ENSMUST00000004634.6:6 AK044280:6 BC043483:19 BC052733:103 U75215:106 AF246129:218 | |all_trans=ENSMUST00000109594.7:0 NM_018861:0 uc007idb.2:0 AK140866:0 AK148075:0 AK136900:0 AK139248:0 ENSMUST00000004634.6:6 AK044280:6 BC043483:19 BC052733:103 U75215:106 AF246129:218 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-19 | |distance_to_tss=-19 | ||
|end=20332774 | |end=20332774 | ||
| + | |end_of_center_position=20332732 | ||
|entrez_id=55963 | |entrez_id=55963 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=ASCT-1 | + | |gene_alias=ASCT-1 |
|gene_description="solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" | |gene_description="solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" | ||
|gene_id=55963 | |gene_id=55963 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=20332689 | |start=20332689 | ||
| + | |start_of_center_position=20332731 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109594.7 NM_018861 uc007idb.2 AK140866 AK148075 AK136900 AK139248 | |transcript_name=ENSMUST00000109594.7 NM_018861 uc007idb.2 AK140866 AK148075 AK136900 AK139248 | ||
Revision as of 21:53, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20332731 |
|---|---|
| End of the center position in the TSS region: | 20332732 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109594.7 NM_018861 uc007idb.2 AK140866 AK148075 AK136900 AK139248 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000109594.7:0 NM_018861:0 uc007idb.2:0 AK140866:0 AK148075:0 AK136900:0 AK139248:0 ENSMUST00000004634.6:6 AK044280:6 BC043483:19 BC052733:103 U75215:106 AF246129:218 |
TATA-Box annotation
| Distance to TSS: | -19 |
|---|---|
| Nearest PromoterID: | NM_018861 |
| Entrez ID: | 55963 |
| Nearest Unigene: | Mm.6379 |
| Nearest Refseq: | NM_018861 |
| Nearest Ensembl: | ENSMUSG00000020142 |
| Gene Name: | "solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" |
| Gene Alias: | ASCT-1 |
| Gene Description: | "solute carrier family 1 (glutamate/neutral amino acid transporter), member 4" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
