Difference between revisions of "TSS:Mm 101235.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.065 |distance= |distance_to_tss=-254 |end=20631725 |entrez_id=58172 |gc_percent=0.631841 |gene_alias=AB041541|AU021878|Kiaa0127|MNCb-1504...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AU021878= | ||
| + | |Kiaa0127= | ||
| + | |MNCb-1504= | ||
| + | |SEI-2= | ||
| + | |Sei2= | ||
| + | |TRIP-Br2= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 5: | Line 11: | ||
|distance_to_tss=-254 | |distance_to_tss=-254 | ||
|end=20631725 | |end=20631725 | ||
| + | |end_of_center_position=20631724 | ||
|entrez_id=58172 | |entrez_id=58172 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=AB041541 | + | |gene_alias=AB041541 |
|gene_description=SERTA domain containing 2 | |gene_description=SERTA domain containing 2 | ||
|gene_name=Sertad2 | |gene_name=Sertad2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA0127= | ||
|nearest_ensembl=ENSMUSG00000049800 | |nearest_ensembl=ENSMUSG00000049800 | ||
|nearest_promoter_id=NM_001038625 | |nearest_promoter_id=NM_001038625 | ||
| Line 18: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=20631721 | |start=20631721 | ||
| + | |start_of_center_position=20631723 | ||
|strand=- | |strand=- | ||
|tata_box="-36(TGCCATAAATGC,-,0.00)" | |tata_box="-36(TGCCATAAATGC,-,0.00)" | ||
Revision as of 21:55, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 20631723 |
|---|---|
| End of the center position in the TSS region: | 20631724 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -254 |
|---|---|
| Nearest PromoterID: | NM_001038625 |
| Entrez ID: | 58172 |
| Nearest Unigene: | Mm.339676 |
| Nearest Refseq: | NM_021372 |
| Nearest Ensembl: | ENSMUSG00000049800 |
| Gene Name: | Sertad2 |
| Gene Alias: | AB041541 |
| Gene Description: | SERTA domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-36(TGCCATAAATGC,-,0.00)" |
