Difference between revisions of "TSS:Mm 101241.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000134897.1:0 ENSMUST00000134517.7:-12 AK150458:-72 AK152308:-72 AK152487:-72 AK161532:-83 ENSMUST00000176585.7:-86 |chr=chr11 |cpg_percent=0.0...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=29327 | |distance_to_tss=29327 | ||
|end=20712238 | |end=20712238 | ||
| + | |end_of_center_position=20712230 | ||
|entrez_id=216549 | |entrez_id=216549 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=20712220 | |start=20712220 | ||
| + | |start_of_center_position=20712229 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000134897.1 | |transcript_name=ENSMUST00000134897.1 | ||
Revision as of 21:57, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20712229 |
|---|---|
| End of the center position in the TSS region: | 20712230 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000134897.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000134897.1:0 ENSMUST00000134517.7:-12 AK150458:-72 AK152308:-72 AK152487:-72 AK161532:-83 ENSMUST00000176585.7:-86 |
TATA-Box annotation
| Distance to TSS: | 29327 |
|---|---|
| Nearest PromoterID: | NM_001290545 |
| Entrez ID: | 216549 |
| Nearest Unigene: | Mm.356580 |
| Nearest Refseq: | NM_181411 |
| Nearest Ensembl: | ENSMUSG00000049659 |
| Gene Name: | aftiphilin |
| Gene Alias: | - |
| Gene Description: | aftiphilin |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
