Difference between revisions of "TSS:Mm 160811.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001252503:-22 NM_001290545:-22 NM_181411:-22 uc056yjx.1:-22 uc007idh.3:-22 uc011xry.3:-22 uc007idi.3:-22 AK030572:35 AK042681:40 BC052036:50 ENSMUST0...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
|end=20741534 | |end=20741534 | ||
| + | |end_of_center_position=20741534 | ||
|entrez_id=216549 | |entrez_id=216549 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=20741533 | |start=20741533 | ||
| + | |start_of_center_position=20741533 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_001252503 NM_001290545 NM_181411 uc056yjx.1 uc007idh.3 uc011xry.3 uc007idi.3 | |transcript_name=NM_001252503 NM_001290545 NM_181411 uc056yjx.1 uc007idh.3 uc011xry.3 uc007idi.3 | ||
Revision as of 21:57, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20741533 |
|---|---|
| End of the center position in the TSS region: | 20741534 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001252503 NM_001290545 NM_181411 uc056yjx.1 uc007idh.3 uc011xry.3 uc007idi.3 |
|---|---|
| Distance: | -22 |
| Num_trans: | 14 |
| All_trans: | NM_001252503:-22 NM_001290545:-22 NM_181411:-22 uc056yjx.1:-22 uc007idh.3:-22 uc011xry.3:-22 uc007idi.3:-22 AK030572:35 AK042681:40 BC052036:50 ENSMUST00000035350.11:-55 AK138793:57 ENSMUST00000177543.7:79 AK029681:79 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_001290545 |
| Entrez ID: | 216549 |
| Nearest Unigene: | Mm.356580 |
| Nearest Refseq: | NM_181411 |
| Nearest Ensembl: | ENSMUSG00000049659 |
| Gene Name: | aftiphilin |
| Gene Alias: | - |
| Gene Description: | aftiphilin |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
