Difference between revisions of "TSS:Mm 162980.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000144441.7:24 ENSMUST00000132928.1:-221 AK041053:-221 AK167557:-239 ENSMUST00000047028.8:-255 ENSMUST00000154300.7:-255 BC019131:-256 NM_17375...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |A530071M23= | ||
| + | |Grpa= | ||
| + | |Hspc159= | ||
| + | |Lgalsla= | ||
|all_trans=ENSMUST00000144441.7:24 ENSMUST00000132928.1:-221 AK041053:-221 AK167557:-239 ENSMUST00000047028.8:-255 ENSMUST00000154300.7:-255 BC019131:-256 NM_173752:-307 uc007idj.2:-307 AK156350:-435 AB341430:440 AK193913:485 AK204490:485 | |all_trans=ENSMUST00000144441.7:24 ENSMUST00000132928.1:-221 AK041053:-221 AK167557:-239 ENSMUST00000047028.8:-255 ENSMUST00000154300.7:-255 BC019131:-256 NM_173752:-307 uc007idj.2:-307 AK156350:-435 AB341430:440 AK193913:485 AK204490:485 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=318 | |distance_to_tss=318 | ||
|end=20830801 | |end=20830801 | ||
| + | |end_of_center_position=20830790 | ||
|entrez_id=216551 | |entrez_id=216551 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=1110067D22Rik | + | |gene_alias=1110067D22Rik |
|gene_description="lectin, galactoside binding-like" | |gene_description="lectin, galactoside binding-like" | ||
|gene_id=216551 | |gene_id=216551 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=20830778 | |start=20830778 | ||
| + | |start_of_center_position=20830789 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000144441.7 | |transcript_name=ENSMUST00000144441.7 | ||
Revision as of 21:58, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20830789 |
|---|---|
| End of the center position in the TSS region: | 20830790 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000144441.7 |
|---|---|
| Distance: | 24 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000144441.7:24 ENSMUST00000132928.1:-221 AK041053:-221 AK167557:-239 ENSMUST00000047028.8:-255 ENSMUST00000154300.7:-255 BC019131:-256 NM_173752:-307 uc007idj.2:-307 AK156350:-435 AB341430:440 AK193913:485 AK204490:485 |
TATA-Box annotation
| Distance to TSS: | 318 |
|---|---|
| Nearest PromoterID: | NM_173752 |
| Entrez ID: | 216551 |
| Nearest Unigene: | Mm.76694 |
| Nearest Refseq: | NM_173752 |
| Nearest Ensembl: | ENSMUSG00000042363 |
| Gene Name: | "lectin, galactoside binding-like" |
| Gene Alias: | 1110067D22Rik |
| Gene Description: | "lectin, galactoside binding-like" |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
