Difference between revisions of "TSS:Mm 101255.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK156350:-17 NM_173752:97 uc007idj.2:97 BC019131:148 ENSMUST00000047028.8:149 ENSMUST00000154300.7:149 AK167557:165 ENSMUST00000132928.1:183 AK041053:18...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |A530071M23= | ||
| + | |Grpa= | ||
| + | |Hspc159= | ||
| + | |Lgalsla= | ||
|all_trans=AK156350:-17 NM_173752:97 uc007idj.2:97 BC019131:148 ENSMUST00000047028.8:149 ENSMUST00000154300.7:149 AK167557:165 ENSMUST00000132928.1:183 AK041053:183 ENSMUST00000144441.7:450 | |all_trans=AK156350:-17 NM_173752:97 uc007idj.2:97 BC019131:148 ENSMUST00000047028.8:149 ENSMUST00000154300.7:149 AK167557:165 ENSMUST00000132928.1:183 AK041053:183 ENSMUST00000144441.7:450 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-104 | |distance_to_tss=-104 | ||
|end=20831219 | |end=20831219 | ||
| + | |end_of_center_position=20831212 | ||
|entrez_id=216551 | |entrez_id=216551 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=1110067D22Rik | + | |gene_alias=1110067D22Rik |
|gene_description="lectin, galactoside binding-like" | |gene_description="lectin, galactoside binding-like" | ||
|gene_id=216551 | |gene_id=216551 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=20831204 | |start=20831204 | ||
| + | |start_of_center_position=20831211 | ||
|strand=- | |strand=- | ||
|tata_box="-2(GCCTTTAAATGC,+,0.00),-2(GCCTTTAAATGC,-,0.00)" | |tata_box="-2(GCCTTTAAATGC,+,0.00),-2(GCCTTTAAATGC,-,0.00)" | ||
Revision as of 21:58, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20831211 |
|---|---|
| End of the center position in the TSS region: | 20831212 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK156350 |
|---|---|
| Distance: | -17 |
| Num_trans: | 10 |
| All_trans: | AK156350:-17 NM_173752:97 uc007idj.2:97 BC019131:148 ENSMUST00000047028.8:149 ENSMUST00000154300.7:149 AK167557:165 ENSMUST00000132928.1:183 AK041053:183 ENSMUST00000144441.7:450 |
TATA-Box annotation
| Distance to TSS: | -104 |
|---|---|
| Nearest PromoterID: | NM_173752 |
| Entrez ID: | 216551 |
| Nearest Unigene: | Mm.76694 |
| Nearest Refseq: | NM_173752 |
| Nearest Ensembl: | ENSMUSG00000042363 |
| Gene Name: | "lectin, galactoside binding-like" |
| Gene Alias: | 1110067D22Rik |
| Gene Description: | "lectin, galactoside binding-like" |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-2(GCCTTTAAATGC,+,0.00),-2(GCCTTTAAATGC,-,0.00)" |
