Difference between revisions of "TSS:Mm 101256.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK156350:0 NM_173752:116 uc007idj.2:116 BC019131:167 ENSMUST00000047028.8:168 ENSMUST00000154300.7:168 AK167557:184 ENSMUST00000132928.1:202 AK041053:20...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |A530071M23= | ||
| + | |Grpa= | ||
| + | |Hspc159= | ||
| + | |Lgalsla= | ||
|all_trans=AK156350:0 NM_173752:116 uc007idj.2:116 BC019131:167 ENSMUST00000047028.8:168 ENSMUST00000154300.7:168 AK167557:184 ENSMUST00000132928.1:202 AK041053:202 ENSMUST00000144441.7:469 | |all_trans=AK156350:0 NM_173752:116 uc007idj.2:116 BC019131:167 ENSMUST00000047028.8:168 ENSMUST00000154300.7:168 AK167557:184 ENSMUST00000132928.1:202 AK041053:202 ENSMUST00000144441.7:469 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-136 | |distance_to_tss=-136 | ||
|end=20831265 | |end=20831265 | ||
| + | |end_of_center_position=20831245 | ||
|entrez_id=216551 | |entrez_id=216551 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=1110067D22Rik | + | |gene_alias=1110067D22Rik |
|gene_description="lectin, galactoside binding-like" | |gene_description="lectin, galactoside binding-like" | ||
|gene_id=216551 | |gene_id=216551 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=20831223 | |start=20831223 | ||
| + | |start_of_center_position=20831244 | ||
|strand=- | |strand=- | ||
|tata_box="30(GCCTTTAAATGC,+,0.00),30(GCCTTTAAATGC,-,0.00)" | |tata_box="30(GCCTTTAAATGC,+,0.00),30(GCCTTTAAATGC,-,0.00)" | ||
Revision as of 21:58, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20831244 |
|---|---|
| End of the center position in the TSS region: | 20831245 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK156350 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | AK156350:0 NM_173752:116 uc007idj.2:116 BC019131:167 ENSMUST00000047028.8:168 ENSMUST00000154300.7:168 AK167557:184 ENSMUST00000132928.1:202 AK041053:202 ENSMUST00000144441.7:469 |
TATA-Box annotation
| Distance to TSS: | -136 |
|---|---|
| Nearest PromoterID: | NM_173752 |
| Entrez ID: | 216551 |
| Nearest Unigene: | Mm.76694 |
| Nearest Refseq: | NM_173752 |
| Nearest Ensembl: | ENSMUSG00000042363 |
| Gene Name: | "lectin, galactoside binding-like" |
| Gene Alias: | 1110067D22Rik |
| Gene Description: | "lectin, galactoside binding-like" |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "30(GCCTTTAAATGC,+,0.00),30(GCCTTTAAATGC,-,0.00)" |
