Difference between revisions of "TSS:Mm 162983.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_139297:173 uc007ids.4:173 AK185393:277 BC061208:289 AK209798:322 AK196595:323 AK197624:323 ENSMUST00000102875.10:325 AF424698:325 AK033445:327 BC0238...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |UGPase= | ||
|all_trans=NM_139297:173 uc007ids.4:173 AK185393:277 BC061208:289 AK209798:322 AK196595:323 AK197624:323 ENSMUST00000102875.10:325 AF424698:325 AK033445:327 BC023810:344 AK213550:-362 ENSMUST00000060895.5:-395 BC025585:-395 NM_001290634:-461 uc007idt.4:-461 | |all_trans=NM_139297:173 uc007ids.4:173 AK185393:277 BC061208:289 AK209798:322 AK196595:323 AK197624:323 ENSMUST00000102875.10:325 AF424698:325 AK033445:327 BC023810:344 AK213550:-362 ENSMUST00000060895.5:-395 BC025585:-395 NM_001290634:-461 uc007idt.4:-461 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-175 | |distance_to_tss=-175 | ||
|end=21370806 | |end=21370806 | ||
| + | |end_of_center_position=21370804 | ||
|entrez_id=216558 | |entrez_id=216558 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=UDPGP | + | |gene_alias=UDPGP |
|gene_description=UDP-glucose pyrophosphorylase 2 | |gene_description=UDP-glucose pyrophosphorylase 2 | ||
|gene_id=216558 | |gene_id=216558 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=21370801 | |start=21370801 | ||
| + | |start_of_center_position=21370803 | ||
|strand=- | |strand=- | ||
|tata_box="88(GGCTATTTATGG,-,0.00)" | |tata_box="88(GGCTATTTATGG,-,0.00)" | ||
Revision as of 22:06, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21370803 |
|---|---|
| End of the center position in the TSS region: | 21370804 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_139297 uc007ids.4 |
|---|---|
| Distance: | 173 |
| Num_trans: | 16 |
| All_trans: | NM_139297:173 uc007ids.4:173 AK185393:277 BC061208:289 AK209798:322 AK196595:323 AK197624:323 ENSMUST00000102875.10:325 AF424698:325 AK033445:327 BC023810:344 AK213550:-362 ENSMUST00000060895.5:-395 BC025585:-395 NM_001290634:-461 uc007idt.4:-461 |
TATA-Box annotation
| Distance to TSS: | -175 |
|---|---|
| Nearest PromoterID: | NM_139297 |
| Entrez ID: | 216558 |
| Nearest Unigene: | Mm.28877 |
| Nearest Refseq: | NM_139297 |
| Nearest Ensembl: | ENSMUSG00000001891 |
| Gene Name: | UDP-glucose pyrophosphorylase 2 |
| Gene Alias: | UDPGP |
| Gene Description: | UDP-glucose pyrophosphorylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "88(GGCTATTTATGG,-,0.00)" |
