Difference between revisions of "TSS:Mm 101280.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0 |distance= |distance_to_tss=1964 |end=21569971 |entrez_id=17449 |gc_percent=0.298507 |gene_alias=B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mo...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |D17921= | ||
| + | |MDH-s= | ||
| + | |MDHA= | ||
| + | |Mor-2= | ||
| + | |Mor2= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 5: | Line 10: | ||
|distance_to_tss=1964 | |distance_to_tss=1964 | ||
|end=21569971 | |end=21569971 | ||
| + | |end_of_center_position=21569970 | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.298507 | |gc_percent=0.298507 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik |
|gene_description="malate dehydrogenase 1, NAD (soluble)" | |gene_description="malate dehydrogenase 1, NAD (soluble)" | ||
|gene_name=Mdh1 | |gene_name=Mdh1 | ||
| Line 18: | Line 24: | ||
|species=mouse | |species=mouse | ||
|start=21569968 | |start=21569968 | ||
| + | |start_of_center_position=21569969 | ||
|strand=- | |strand=- | ||
|tata_box="13(CTTTTTAAAAGG,+,0.00),13(CTTTTTAAAAGG,-,0.00)" | |tata_box="13(CTTTTTAAAAGG,+,0.00),13(CTTTTTAAAAGG,-,0.00)" | ||
Revision as of 22:07, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21569969 |
|---|---|
| End of the center position in the TSS region: | 21569970 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1964 |
|---|---|
| Nearest PromoterID: | NM_008618 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | Mdh1 |
| Gene Alias: | B230377B03Rik |
| Gene Description: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.298507 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "13(CTTTTTAAAAGG,+,0.00),13(CTTTTTAAAAGG,-,0.00)" |
