Difference between revisions of "TSS:Mm 101282.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK002404:0 BC050940:-3 AK008270:-9 AK002395:-15 M29462:-16 AK168545:16 AK164785:-17 AK077724:-19 uc029rkv.1:-21 AK046369:-21 AK005237:-33 NM_001316675:-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |D17921= | ||
| + | |MDH-s= | ||
| + | |MDHA= | ||
| + | |Mor-2= | ||
| + | |Mor2= | ||
|all_trans=AK002404:0 BC050940:-3 AK008270:-9 AK002395:-15 M29462:-16 AK168545:16 AK164785:-17 AK077724:-19 uc029rkv.1:-21 AK046369:-21 AK005237:-33 NM_001316675:-137 NM_008618:-137 uc007idv.2:-137 ENSMUST00000102874.10:-396 | |all_trans=AK002404:0 BC050940:-3 AK008270:-9 AK002395:-15 M29462:-16 AK168545:16 AK164785:-17 AK077724:-19 uc029rkv.1:-21 AK046369:-21 AK005237:-33 NM_001316675:-137 NM_008618:-137 uc007idv.2:-137 ENSMUST00000102874.10:-396 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=142 | |distance_to_tss=142 | ||
|end=21571797 | |end=21571797 | ||
| + | |end_of_center_position=21571792 | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik |
|gene_description="malate dehydrogenase 1, NAD (soluble)" | |gene_description="malate dehydrogenase 1, NAD (soluble)" | ||
|gene_id=17449 | |gene_id=17449 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=21571786 | |start=21571786 | ||
| + | |start_of_center_position=21571791 | ||
|strand=- | |strand=- | ||
|transcript_name=AK002404 | |transcript_name=AK002404 | ||
Revision as of 22:07, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21571791 |
|---|---|
| End of the center position in the TSS region: | 21571792 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK002404 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | AK002404:0 BC050940:-3 AK008270:-9 AK002395:-15 M29462:-16 AK168545:16 AK164785:-17 AK077724:-19 uc029rkv.1:-21 AK046369:-21 AK005237:-33 NM_001316675:-137 NM_008618:-137 uc007idv.2:-137 ENSMUST00000102874.10:-396 |
TATA-Box annotation
| Distance to TSS: | 142 |
|---|---|
| Nearest PromoterID: | NM_008618 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Alias: | B230377B03Rik |
| Gene Description: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
