Difference between revisions of "TSS:Mm 101283.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc029rkv.1:0 AK002395:0 M29462:0 BC050940:0 AK164785:0 AK008270:0 AK077724:0 AK046369:0 AK005237:-3 AK002404:7 AK168545:28 NM_001316675:-107 NM_008618:-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |D17921= | ||
| + | |MDH-s= | ||
| + | |MDHA= | ||
| + | |Mor-2= | ||
| + | |Mor2= | ||
|all_trans=uc029rkv.1:0 AK002395:0 M29462:0 BC050940:0 AK164785:0 AK008270:0 AK077724:0 AK046369:0 AK005237:-3 AK002404:7 AK168545:28 NM_001316675:-107 NM_008618:-107 uc007idv.2:-107 ENSMUST00000102874.10:-366 | |all_trans=uc029rkv.1:0 AK002395:0 M29462:0 BC050940:0 AK164785:0 AK008270:0 AK077724:0 AK046369:0 AK005237:-3 AK002404:7 AK168545:28 NM_001316675:-107 NM_008618:-107 uc007idv.2:-107 ENSMUST00000102874.10:-366 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=121 | |distance_to_tss=121 | ||
|end=21571827 | |end=21571827 | ||
| + | |end_of_center_position=21571813 | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik |
|gene_description="malate dehydrogenase 1, NAD (soluble)" | |gene_description="malate dehydrogenase 1, NAD (soluble)" | ||
|gene_id=17449 | |gene_id=17449 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=21571798 | |start=21571798 | ||
| + | |start_of_center_position=21571812 | ||
|strand=- | |strand=- | ||
|transcript_name=uc029rkv.1 AK002395 M29462 BC050940 AK164785 AK008270 AK077724 AK046369 | |transcript_name=uc029rkv.1 AK002395 M29462 BC050940 AK164785 AK008270 AK077724 AK046369 | ||
Revision as of 22:07, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21571812 |
|---|---|
| End of the center position in the TSS region: | 21571813 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | uc029rkv.1 AK002395 M29462 BC050940 AK164785 AK008270 AK077724 AK046369 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | uc029rkv.1:0 AK002395:0 M29462:0 BC050940:0 AK164785:0 AK008270:0 AK077724:0 AK046369:0 AK005237:-3 AK002404:7 AK168545:28 NM_001316675:-107 NM_008618:-107 uc007idv.2:-107 ENSMUST00000102874.10:-366 |
TATA-Box annotation
| Distance to TSS: | 121 |
|---|---|
| Nearest PromoterID: | NM_008618 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Alias: | B230377B03Rik |
| Gene Description: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
