Difference between revisions of "TSS:Mm 101284.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001316675:104 NM_008618:104 uc007idv.2:104 ENSMUST00000102874.10:-144 AK005237:208 uc029rkv.1:220 AK046369:220 AK077724:222 AK164785:224 M29462:225 A...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |D17921= | ||
| + | |MDH-s= | ||
| + | |MDHA= | ||
| + | |Mor-2= | ||
| + | |Mor2= | ||
|all_trans=NM_001316675:104 NM_008618:104 uc007idv.2:104 ENSMUST00000102874.10:-144 AK005237:208 uc029rkv.1:220 AK046369:220 AK077724:222 AK164785:224 M29462:225 AK002395:226 AK008270:232 BC050940:238 AK002404:246 AK168545:267 ENSMUST00000125302.1:-318 | |all_trans=NM_001316675:104 NM_008618:104 uc007idv.2:104 ENSMUST00000102874.10:-144 AK005237:208 uc029rkv.1:220 AK046369:220 AK077724:222 AK164785:224 M29462:225 AK002395:226 AK008270:232 BC050940:238 AK002404:246 AK168545:267 ENSMUST00000125302.1:-318 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=-109 | |distance_to_tss=-109 | ||
|end=21572049 | |end=21572049 | ||
| + | |end_of_center_position=21572044 | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik |
|gene_description="malate dehydrogenase 1, NAD (soluble)" | |gene_description="malate dehydrogenase 1, NAD (soluble)" | ||
|gene_id=17449 | |gene_id=17449 | ||
| Line 24: | Line 30: | ||
|species=mouse | |species=mouse | ||
|start=21572037 | |start=21572037 | ||
| + | |start_of_center_position=21572043 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_001316675 NM_008618 uc007idv.2 | |transcript_name=NM_001316675 NM_008618 uc007idv.2 | ||
Revision as of 22:07, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 21572043 |
|---|---|
| End of the center position in the TSS region: | 21572044 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001316675 NM_008618 uc007idv.2 |
|---|---|
| Distance: | 104 |
| Num_trans: | 16 |
| All_trans: | NM_001316675:104 NM_008618:104 uc007idv.2:104 ENSMUST00000102874.10:-144 AK005237:208 uc029rkv.1:220 AK046369:220 AK077724:222 AK164785:224 M29462:225 AK002395:226 AK008270:232 BC050940:238 AK002404:246 AK168545:267 ENSMUST00000125302.1:-318 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NM_001316675 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Alias: | B230377B03Rik |
| Gene Description: | "malate dehydrogenase 1, NAD (soluble)" |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
