Difference between revisions of "TSS:Mm 101289.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000006071.13:0 AK158588:0 AK042975:0 AK083434:0 AK050758:0 AK083671:12 NM_011023:-20 uc007idy.1:-20 uc007idz.1:-20 BC057105:45 ENSMUST000001723...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=33 | |distance_to_tss=33 | ||
|end=22001631 | |end=22001631 | ||
| + | |end_of_center_position=22001619 | ||
|entrez_id=18423 | |entrez_id=18423 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=A730044F23Rik | + | |gene_alias=A730044F23Rik |
|gene_description=orthodenticle homeobox 1 | |gene_description=orthodenticle homeobox 1 | ||
|gene_id=18423 | |gene_id=18423 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:97450 | |hgnc_mgi_id=MGI:97450 | ||
| + | |jv= | ||
|nearest_ensembl=ENSMUSG00000005917 | |nearest_ensembl=ENSMUSG00000005917 | ||
|nearest_promoter_id=NM_011023 | |nearest_promoter_id=NM_011023 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=22001605 | |start=22001605 | ||
| + | |start_of_center_position=22001618 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000006071.13 AK158588 AK042975 AK083434 AK050758 | |transcript_name=ENSMUST00000006071.13 AK158588 AK042975 AK083434 AK050758 | ||
Revision as of 22:08, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22001618 |
|---|---|
| End of the center position in the TSS region: | 22001619 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000006071.13 AK158588 AK042975 AK083434 AK050758 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000006071.13:0 AK158588:0 AK042975:0 AK083434:0 AK050758:0 AK083671:12 NM_011023:-20 uc007idy.1:-20 uc007idz.1:-20 BC057105:45 ENSMUST00000172395.2:-79 AK049430:-79 BC058354:445 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_011023 |
| Entrez ID: | 18423 |
| Nearest Unigene: | Mm.129663 |
| Nearest Refseq: | NM_011023 |
| Nearest Ensembl: | ENSMUSG00000005917 |
| Gene Name: | orthodenticle homeobox 1 |
| Gene Alias: | A730044F23Rik |
| Gene Description: | orthodenticle homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
