Difference between revisions of "TSS:Mm 101308.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000180581.1:-463 AK138446:-463 |chr=chr11 |cpg_percent=0.015 |distance=-463 |distance_to_tss=98127 |end=22610416 |entrez_id=103765 |gc_percent=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW049890= | ||
|all_trans=ENSMUST00000180581.1:-463 AK138446:-463 | |all_trans=ENSMUST00000180581.1:-463 AK138446:-463 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=98127 | |distance_to_tss=98127 | ||
|end=22610416 | |end=22610416 | ||
| + | |end_of_center_position=22610411 | ||
|entrez_id=103765 | |entrez_id=103765 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=AI503894 | + | |gene_alias=AI503894 |
|gene_description=transmembrane protein 17 | |gene_description=transmembrane protein 17 | ||
|gene_id= | |gene_id= | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=22610404 | |start=22610404 | ||
| + | |start_of_center_position=22610410 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000180581.1 AK138446 | |transcript_name=ENSMUST00000180581.1 AK138446 | ||
Revision as of 22:11, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22610410 |
|---|---|
| End of the center position in the TSS region: | 22610411 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000180581.1 AK138446 |
|---|---|
| Distance: | -463 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000180581.1:-463 AK138446:-463 |
TATA-Box annotation
| Distance to TSS: | 98127 |
|---|---|
| Nearest PromoterID: | NM_153596 |
| Entrez ID: | 103765 |
| Nearest Unigene: | Mm.221274 |
| Nearest Refseq: | NM_153596 |
| Nearest Ensembl: | ENSMUSG00000049904 |
| Gene Name: | "predicted gene, 26829" |
| Gene Alias: | AI503894 |
| Gene Description: | transmembrane protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
