Difference between revisions of "TSS:Mm 101315.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc033fub.1:-7 AK195679:492 AK192396:492 |chr=chr11 |cpg_percent=0.015 |distance=-7 |distance_to_tss=22561 |end=22837179 |entrez_id=53625 |gc_percent=0.4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA409404= | ||
| + | |AW260308= | ||
| + | |B3Galt6= | ||
| + | |B3gnt1= | ||
| + | |BGnT-1= | ||
| + | |BGnT-2= | ||
| + | |BGnT1= | ||
| + | |BGnT2= | ||
| + | |Beta3gnt= | ||
|all_trans=uc033fub.1:-7 AK195679:492 AK192396:492 | |all_trans=uc033fub.1:-7 AK195679:492 AK192396:492 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 15: | ||
|distance_to_tss=22561 | |distance_to_tss=22561 | ||
|end=22837179 | |end=22837179 | ||
| + | |end_of_center_position=22837174 | ||
|entrez_id=53625 | |entrez_id=53625 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=AA408337 | + | |gene_alias=AA408337 |
|gene_description="UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" | |gene_description="UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" | ||
|gene_id= | |gene_id= | ||
| Line 21: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=22837168 | |start=22837168 | ||
| + | |start_of_center_position=22837173 | ||
|strand=- | |strand=- | ||
|transcript_name=uc033fub.1 | |transcript_name=uc033fub.1 | ||
Revision as of 22:12, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22837173 |
|---|---|
| End of the center position in the TSS region: | 22837174 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | uc033fub.1 |
|---|---|
| Distance: | -7 |
| Num_trans: | 3 |
| All_trans: | uc033fub.1:-7 AK195679:492 AK192396:492 |
TATA-Box annotation
| Distance to TSS: | 22561 |
|---|---|
| Nearest PromoterID: | NM_016888 |
| Entrez ID: | 53625 |
| Nearest Unigene: | Mm.395495 |
| Nearest Refseq: | NM_016888 |
| Nearest Ensembl: | ENSMUSG00000051650 |
| Gene Name: | B3gnt2 |
| Gene Alias: | AA408337 |
| Gene Description: | "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
