Difference between revisions of "TSS:Mm 101323.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK163599:0 ENSMUST00000055549.3:-32 NM_001169114:97 uc007iei.2:97 BC009075:97 ENSMUST00000062844.10:332 |chr=chr11 |cpg_percent=0.075 |distance=0 |dista...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA409404= | ||
| + | |AW260308= | ||
| + | |B3Galt6= | ||
| + | |B3gnt1= | ||
| + | |BGnT-1= | ||
| + | |BGnT-2= | ||
| + | |BGnT1= | ||
| + | |BGnT2= | ||
| + | |Beta3gnt= | ||
|all_trans=AK163599:0 ENSMUST00000055549.3:-32 NM_001169114:97 uc007iei.2:97 BC009075:97 ENSMUST00000062844.10:332 | |all_trans=AK163599:0 ENSMUST00000055549.3:-32 NM_001169114:97 uc007iei.2:97 BC009075:97 ENSMUST00000062844.10:332 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 15: | ||
|distance_to_tss=-108 | |distance_to_tss=-108 | ||
|end=22860456 | |end=22860456 | ||
| + | |end_of_center_position=22860445 | ||
|entrez_id=53625 | |entrez_id=53625 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=AA408337 | + | |gene_alias=AA408337 |
|gene_description="UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" | |gene_description="UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" | ||
|gene_name=B3gnt2 | |gene_name=B3gnt2 | ||
| Line 19: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=22860432 | |start=22860432 | ||
| + | |start_of_center_position=22860444 | ||
|strand=- | |strand=- | ||
|transcript_name=AK163599 | |transcript_name=AK163599 | ||
Revision as of 22:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22860444 |
|---|---|
| End of the center position in the TSS region: | 22860445 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK163599 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | AK163599:0 ENSMUST00000055549.3:-32 NM_001169114:97 uc007iei.2:97 BC009075:97 ENSMUST00000062844.10:332 |
TATA-Box annotation
| Distance to TSS: | -108 |
|---|---|
| Nearest PromoterID: | NM_001169114 |
| Entrez ID: | 53625 |
| Nearest Unigene: | Mm.395495 |
| Nearest Refseq: | NM_016888 |
| Nearest Ensembl: | ENSMUSG00000051650 |
| Gene Name: | B3gnt2 |
| Gene Alias: | AA408337 |
| Gene Description: | "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
