Difference between revisions of "TSS:Mm 101325.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000055549.3:101 AK163599:149 NM_001169114:253 uc007iei.2:253 BC009075:253 ENSMUST00000173660.1:-351 ENSMUST00000062844.10:488 |chr=chr11 |cpg_p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA409404= | ||
| + | |AW260308= | ||
| + | |B3Galt6= | ||
| + | |B3gnt1= | ||
| + | |BGnT-1= | ||
| + | |BGnT-2= | ||
| + | |BGnT1= | ||
| + | |BGnT2= | ||
| + | |Beta3gnt= | ||
|all_trans=ENSMUST00000055549.3:101 AK163599:149 NM_001169114:253 uc007iei.2:253 BC009075:253 ENSMUST00000173660.1:-351 ENSMUST00000062844.10:488 | |all_trans=ENSMUST00000055549.3:101 AK163599:149 NM_001169114:253 uc007iei.2:253 BC009075:253 ENSMUST00000173660.1:-351 ENSMUST00000062844.10:488 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 15: | ||
|distance_to_tss=-263 | |distance_to_tss=-263 | ||
|end=22860610 | |end=22860610 | ||
| + | |end_of_center_position=22860600 | ||
|entrez_id=53625 | |entrez_id=53625 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=AA408337 | + | |gene_alias=AA408337 |
|gene_description="UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" | |gene_description="UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" | ||
|gene_id=53625 | |gene_id=53625 | ||
| Line 24: | Line 34: | ||
|species=mouse | |species=mouse | ||
|start=22860588 | |start=22860588 | ||
| + | |start_of_center_position=22860599 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000055549.3 | |transcript_name=ENSMUST00000055549.3 | ||
Revision as of 22:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22860599 |
|---|---|
| End of the center position in the TSS region: | 22860600 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000055549.3 |
|---|---|
| Distance: | 101 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000055549.3:101 AK163599:149 NM_001169114:253 uc007iei.2:253 BC009075:253 ENSMUST00000173660.1:-351 ENSMUST00000062844.10:488 |
TATA-Box annotation
| Distance to TSS: | -263 |
|---|---|
| Nearest PromoterID: | NM_001169114 |
| Entrez ID: | 53625 |
| Nearest Unigene: | Mm.395495 |
| Nearest Refseq: | NM_016888 |
| Nearest Ensembl: | ENSMUSG00000051650 |
| Gene Name: | "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" |
| Gene Alias: | AA408337 |
| Gene Description: | "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
