Difference between revisions of "TSS:Mm 160815.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc007iej.2:-167 BC098462:-167 ENSMUST00000161944.1:-422 |chr=chr11 |cpg_percent=0.03 |distance=-167 |distance_to_tss=-15480 |end=22956525 |entrez_id=221...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Irlgs2= | ||
| + | |SP2= | ||
| + | |U2af1-rs1= | ||
| + | |U2afbp-rs= | ||
|all_trans=uc007iej.2:-167 BC098462:-167 ENSMUST00000161944.1:-422 | |all_trans=uc007iej.2:-167 BC098462:-167 ENSMUST00000161944.1:-422 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=-15480 | |distance_to_tss=-15480 | ||
|end=22956525 | |end=22956525 | ||
| + | |end_of_center_position=22956525 | ||
|entrez_id=22183 | |entrez_id=22183 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=D11Ncvs75 | + | |gene_alias=D11Ncvs75 |
|gene_description="zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1" | |gene_description="zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1" | ||
|gene_id=53625 | |gene_id=53625 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=22956524 | |start=22956524 | ||
| + | |start_of_center_position=22956524 | ||
|strand=- | |strand=- | ||
|transcript_name=uc007iej.2 BC098462 | |transcript_name=uc007iej.2 BC098462 | ||
Revision as of 22:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22956524 |
|---|---|
| End of the center position in the TSS region: | 22956525 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | uc007iej.2 BC098462 |
|---|---|
| Distance: | -167 |
| Num_trans: | 3 |
| All_trans: | uc007iej.2:-167 BC098462:-167 ENSMUST00000161944.1:-422 |
TATA-Box annotation
| Distance to TSS: | -15480 |
|---|---|
| Nearest PromoterID: | NM_011663 |
| Entrez ID: | 22183 |
| Nearest Unigene: | Mm.29542 |
| Nearest Refseq: | NM_011663 |
| Nearest Ensembl: | ENSMUSG00000044068 |
| Gene Name: | "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2" |
| Gene Alias: | D11Ncvs75 |
| Gene Description: | "zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
