Difference between revisions of "TSS:Mm 101327.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000162924.1:0 |chr=chr11 |cpg_percent=0.09 |distance=0 |distance_to_tss=849 |end=22972860 |entrez_id=22183 |gc_percent=0.577114 |gene_alias=D11...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Irlgs2= | ||
| + | |SP2= | ||
| + | |U2af1-rs1= | ||
| + | |U2afbp-rs= | ||
|all_trans=ENSMUST00000162924.1:0 | |all_trans=ENSMUST00000162924.1:0 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=849 | |distance_to_tss=849 | ||
|end=22972860 | |end=22972860 | ||
| + | |end_of_center_position=22972854 | ||
|entrez_id=22183 | |entrez_id=22183 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=D11Ncvs75 | + | |gene_alias=D11Ncvs75 |
|gene_description="zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1" | |gene_description="zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1" | ||
|gene_id=17846 | |gene_id=17846 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=22972847 | |start=22972847 | ||
| + | |start_of_center_position=22972853 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000162924.1 | |transcript_name=ENSMUST00000162924.1 | ||
Revision as of 22:13, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 22972853 |
|---|---|
| End of the center position in the TSS region: | 22972854 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000162924.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | ENSMUST00000162924.1:0 |
TATA-Box annotation
| Distance to TSS: | 849 |
|---|---|
| Nearest PromoterID: | NM_011663 |
| Entrez ID: | 22183 |
| Nearest Unigene: | Mm.29542 |
| Nearest Refseq: | NM_011663 |
| Nearest Ensembl: | ENSMUSG00000044068 |
| Gene Name: | COMM domain containing 1 |
| Gene Alias: | D11Ncvs75 |
| Gene Description: | "zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
