Difference between revisions of "TSS:Mm 101335.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000020529.12:0 NM_172391:0 NM_001290655:0 NM_001290654:0 uc007ifc.2:0 uc007ifb.2:0 uc056ykb.1:0 AK137116:77 AK154196:78 AK155265:78 AK093945:80...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=4 | |distance_to_tss=4 | ||
|end=23498044 | |end=23498044 | ||
| + | |end_of_center_position=23498035 | ||
|entrez_id=268390 | |entrez_id=268390 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=23498025 | |start=23498025 | ||
| + | |start_of_center_position=23498034 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000020529.12 NM_172391 NM_001290655 NM_001290654 uc007ifc.2 uc007ifb.2 uc056ykb.1 | |transcript_name=ENSMUST00000020529.12 NM_172391 NM_001290655 NM_001290654 uc007ifc.2 uc007ifb.2 uc056ykb.1 | ||
Revision as of 22:19, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 23498034 |
|---|---|
| End of the center position in the TSS region: | 23498035 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000020529.12 NM_172391 NM_001290655 NM_001290654 uc007ifc.2 uc007ifb.2 uc056ykb.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENSMUST00000020529.12:0 NM_172391:0 NM_001290655:0 NM_001290654:0 uc007ifc.2:0 uc007ifb.2:0 uc056ykb.1:0 AK137116:77 AK154196:78 AK155265:78 AK093945:80 AK033696:80 BC052829:81 ENSMUST00000109539.7:96 BC038397:96 ENSMUST00000147157.7:121 BC055873:125 ENSMUST00000128559.1:131 BC064012:167 AK186357:234 ENSMUST00000128372.7:488 AK035941:488 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001290655 |
| Entrez ID: | 268390 |
| Nearest Unigene: | Mm.13148 |
| Nearest Refseq: | NM_172391 |
| Nearest Ensembl: | ENSMUSG00000020288 |
| Gene Name: | "AHA1, activator of heat shock protein ATPase 2" |
| Gene Alias: | - |
| Gene Description: | "AHA1, activator of heat shock protein ATPase 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
