Difference between revisions of "TSS:Hg 32001.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000627798.2:18 uc061qak.1:18 ENST00000625449.2:65 uc061qal.1:65 ENST00000586532.5:97 uc061qac.1:97 ENST00000443132.1:116 uc061qao.1:116 |chr=chr2...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-1153 | |distance_to_tss=-1153 | ||
|end=177315037 | |end=177315037 | ||
| + | |end_of_center_position=177315036 | ||
|entrez_id=102465255 | |entrez_id=102465255 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=hsa- | + | |gene_alias=hsa-mir-6512 |
|gene_description=microRNA 6512 | |gene_description=microRNA 6512 | ||
|gene_id=100130691 | |gene_id=100130691 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| + | |mir-6512= | ||
|nearest_ensembl=ENSG00000278418 | |nearest_ensembl=ENSG00000278418 | ||
|nearest_promoter_id=NR_106767 | |nearest_promoter_id=NR_106767 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=177315033 | |start=177315033 | ||
| + | |start_of_center_position=177315035 | ||
|strand=- | |strand=- | ||
|tata_box="-38(GACTTTAAATAG,-,0.00)" | |tata_box="-38(GACTTTAAATAG,-,0.00)" | ||
Revision as of 22:23, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 177315035 |
|---|---|
| End of the center position in the TSS region: | 177315036 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000627798.2 uc061qak.1 |
|---|---|
| Distance: | 18 |
| Num_trans: | 8 |
| All_trans: | ENST00000627798.2:18 uc061qak.1:18 ENST00000625449.2:65 uc061qal.1:65 ENST00000586532.5:97 uc061qac.1:97 ENST00000443132.1:116 uc061qao.1:116 |
TATA-Box annotation
| Distance to TSS: | -1153 |
|---|---|
| Nearest PromoterID: | NR_106767 |
| Entrez ID: | 102465255 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106767 |
| Nearest Ensembl: | ENSG00000278418 |
| Gene Name: | uncharacterized LOC100130691 |
| Gene Alias: | hsa-mir-6512 |
| Gene Description: | microRNA 6512 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-38(GACTTTAAATAG,-,0.00)" |
