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Difference between revisions of "TSS:Hg 103431.1"

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Line 8: Line 8:
 
|distance_to_tss=322
 
|distance_to_tss=322
 
|end=988735
 
|end=988735
 +
|end_of_center_position=988731
 
|entrez_id=23560
 
|entrez_id=23560
 
|gc_percent=0.676617
 
|gc_percent=0.676617
|gene_alias=CRFG|NGB|NOG1
+
|gene_alias=CRFG
 
|gene_description=GTP binding protein 4
 
|gene_description=GTP binding protein 4
 
|gene_id=23560
 
|gene_id=23560
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=988726
 
|start=988726
 +
|start_of_center_position=988730
 
|strand=+
 
|strand=+
 
|transcript_name=AK301721
 
|transcript_name=AK301721

Revision as of 22:25, 11 May 2019

Basic information about the TSS


TSS ID:hg_103431.1
Species:human
Chr:chr10
TSS Classification:yes
Start:988726
End:988735
Strand:+
TSS Score:1
Start of the center position in the TSS region:988730
End of the center position in the TSS region:988731



Gene and protein annotation


Transcript_name:AK301721
Distance:-12
GeneID:23560
HGNC/MGI_ID:HGNC:21535
UniProt_ID:
Gene_name:GTP binding protein 4
Gene_symbol:GTPBP4
Gene_synonyms:CRFG FLJ10686 FLJ10690 NGB NOG1
Gene_source:HGNC:21535



Transcript annotation


Transcript_name:AK301721
Distance:-12
Num_trans:19
All_trans:AK301721:-12 ENST00000360059.5:-21 uc057res.1:-21 AK302219:-226 BC033784:-228 AF325353:-247 KJ898511:-250 ENST00000491635.1:-265 uc057rer.1:-265 AK097093:-265 AK295231:-265 AK001548:-265 AK222861:-265 BC038975:-268 AF120334:-270 BC021243:-277 BC008683:-280 NM_012341:-318 AK001552:-318



TATA-Box annotation


Distance to TSS:322
Nearest PromoterID:NM_012341
Entrez ID:23560
Nearest Unigene:Hs.215766
Nearest Refseq:NM_012341
Nearest Ensembl:ENSG00000107937
Gene Name:GTP binding protein 4
Gene Alias:CRFG
Gene Description:GTP binding protein 4
Gene Type:protein-coding
CpG%:0.055
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):