Difference between revisions of "TSS:Hg 103434.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=-197 | |distance_to_tss=-197 | ||
|end=1049101 | |end=1049101 | ||
| + | |end_of_center_position=1049080 | ||
|entrez_id=3422 | |entrez_id=3422 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=IPP1 | + | |gene_alias=IPP1 |
|gene_description=isopentenyl-diphosphate delta isomerase 1 | |gene_description=isopentenyl-diphosphate delta isomerase 1 | ||
|gene_name=IDI1 | |gene_name=IDI1 | ||
| Line 20: | Line 21: | ||
|species=human | |species=human | ||
|start=1049058 | |start=1049058 | ||
| + | |start_of_center_position=1049079 | ||
|strand=+ | |strand=+ | ||
|tata_box="60(GCGCCTTTAAGG,-,0.00),61(CGCCTTTAAGGG,-,0.00),62(GCCTTTAAGGGG,+,0.00),62(GCCTTTAAGGGG,-,0.00),63(CCTTTAAGGGGG,+,0.00)" | |tata_box="60(GCGCCTTTAAGG,-,0.00),61(CGCCTTTAAGGG,-,0.00),62(GCCTTTAAGGGG,+,0.00),62(GCCTTTAAGGGG,-,0.00),63(CCTTTAAGGGGG,+,0.00)" | ||
Revision as of 22:26, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1049079 |
|---|---|
| End of the center position in the TSS region: | 1049080 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC018045 BC046483 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | BC018045:0 BC046483:0 BC050720:-2 ENST00000358220.5:437 uc031ptc.1:437 AB023199:437 |
TATA-Box annotation
| Distance to TSS: | -197 |
|---|---|
| Nearest PromoterID: | NM_001317957 |
| Entrez ID: | 3422 |
| Nearest Unigene: | Hs.283652 |
| Nearest Refseq: | NM_004508 |
| Nearest Ensembl: | ENSG00000067064 |
| Gene Name: | IDI1 |
| Gene Alias: | IPP1 |
| Gene Description: | isopentenyl-diphosphate delta isomerase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "60(GCGCCTTTAAGG,-,0.00),61(CGCCTTTAAGGG,-,0.00),62(GCCTTTAAGGGG,+,0.00),62(GCCTTTAAGGGG,-,0.00),63(CCTTTAAGGGGG,+,0.00)" |
