Difference between revisions of "TSS:Mm 101388.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000146717.1:-8 AK019722:-8 ENSMUST00000131383.1:-51 uc007ifx.1:-51 uc007ify.1:-51 AK019630:-51 |chr=chr11 |cpg_percent=0.07 |distance=-8 |dista...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BCL-11A= | ||
| + | |Ctip1= | ||
| + | |D930021L15Rik= | ||
| + | |Evi9= | ||
| + | |Evi9a= | ||
| + | |Evi9b= | ||
| + | |Evi9c= | ||
|all_trans=ENSMUST00000146717.1:-8 AK019722:-8 ENSMUST00000131383.1:-51 uc007ifx.1:-51 uc007ify.1:-51 AK019630:-51 | |all_trans=ENSMUST00000146717.1:-8 AK019722:-8 ENSMUST00000131383.1:-51 uc007ifx.1:-51 uc007ify.1:-51 AK019630:-51 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=92075 | |distance_to_tss=92075 | ||
|end=24172773 | |end=24172773 | ||
| + | |end_of_center_position=24172770 | ||
|entrez_id=14025 | |entrez_id=14025 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=2810047E18Rik | + | |gene_alias=2810047E18Rik |
|gene_description=B cell CLL/lymphoma 11A (zinc finger protein) | |gene_description=B cell CLL/lymphoma 11A (zinc finger protein) | ||
|gene_id=78200 | |gene_id=78200 | ||
| Line 17: | Line 25: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1925450 | |hgnc_mgi_id=MGI:1925450 | ||
| + | |mKIAA1809= | ||
|nearest_ensembl=ENSMUSG00000000861 | |nearest_ensembl=ENSMUSG00000000861 | ||
|nearest_promoter_id=NM_001159290 | |nearest_promoter_id=NM_001159290 | ||
| Line 24: | Line 33: | ||
|species=mouse | |species=mouse | ||
|start=24172766 | |start=24172766 | ||
| + | |start_of_center_position=24172769 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000146717.1 AK019722 | |transcript_name=ENSMUST00000146717.1 AK019722 | ||
Revision as of 22:28, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24172769 |
|---|---|
| End of the center position in the TSS region: | 24172770 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000146717.1 AK019722 |
|---|---|
| Distance: | -8 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000146717.1:-8 AK019722:-8 ENSMUST00000131383.1:-51 uc007ifx.1:-51 uc007ify.1:-51 AK019630:-51 |
TATA-Box annotation
| Distance to TSS: | 92075 |
|---|---|
| Nearest PromoterID: | NM_001159290 |
| Entrez ID: | 14025 |
| Nearest Unigene: | Mm.53687 |
| Nearest Refseq: | NM_016707 |
| Nearest Ensembl: | ENSMUSG00000000861 |
| Gene Name: | RIKEN cDNA 4930538E20 gene |
| Gene Alias: | 2810047E18Rik |
| Gene Description: | B cell CLL/lymphoma 11A (zinc finger protein) |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
