Difference between revisions of "TSS:Mm 101398.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |AI447698= | ||
|all_trans=ENSMUST00000124294.7:0 AK154485:0 AK012664:0 AK053297:0 ENSMUST00000125545.1:5 ENSMUST00000078362.12:-257 NM_027260:-257 NM_001252447:-257 uc007igf.2:-257 uc011xsk.2:-257 uc007igg.2:-257 uc007igh.2:-257 ENSMUST00000155728.7:-260 AK089825:-260 ENSMUST00000156264.1:-336 | |all_trans=ENSMUST00000124294.7:0 AK154485:0 AK012664:0 AK053297:0 ENSMUST00000125545.1:5 ENSMUST00000078362.12:-257 NM_027260:-257 NM_001252447:-257 uc007igf.2:-257 uc011xsk.2:-257 uc007igg.2:-257 uc007igh.2:-257 ENSMUST00000155728.7:-260 AK089825:-260 ENSMUST00000156264.1:-336 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=285 | |distance_to_tss=285 | ||
|end=26593663 | |end=26593663 | ||
| + | |end_of_center_position=26593636 | ||
|entrez_id=69922 | |entrez_id=69922 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=2810003O05Rik | + | |gene_alias=2810003O05Rik |
|gene_description=vaccinia related kinase 2 | |gene_description=vaccinia related kinase 2 | ||
|gene_id=69922 | |gene_id=69922 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=26593607 | |start=26593607 | ||
| + | |start_of_center_position=26593635 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000124294.7 AK154485 AK012664 AK053297 | |transcript_name=ENSMUST00000124294.7 AK154485 AK012664 AK053297 | ||
Revision as of 22:29, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 26593635 |
|---|---|
| End of the center position in the TSS region: | 26593636 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000124294.7 AK154485 AK012664 AK053297 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000124294.7:0 AK154485:0 AK012664:0 AK053297:0 ENSMUST00000125545.1:5 ENSMUST00000078362.12:-257 NM_027260:-257 NM_001252447:-257 uc007igf.2:-257 uc011xsk.2:-257 uc007igg.2:-257 uc007igh.2:-257 ENSMUST00000155728.7:-260 AK089825:-260 ENSMUST00000156264.1:-336 |
TATA-Box annotation
| Distance to TSS: | 285 |
|---|---|
| Nearest PromoterID: | NM_027260 |
| Entrez ID: | 69922 |
| Nearest Unigene: | Mm.285351 |
| Nearest Refseq: | NM_027260 |
| Nearest Ensembl: | ENSMUSG00000064090 |
| Gene Name: | vaccinia related kinase 2 |
| Gene Alias: | 2810003O05Rik |
| Gene Description: | vaccinia related kinase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
