Difference between revisions of "TSS:Mm 101412.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000109501.1:-37 AK087049:-37 AK087070:-37 ENSMUST00000093253.9:-67 ENSMUST00000109502.8:-67 AK045568:-67 ENSMUST00000042534.14:-95 NM_181577:-9...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=100 | |distance_to_tss=100 | ||
|end=28584229 | |end=28584229 | ||
| + | |end_of_center_position=28584225 | ||
|entrez_id=216613 | |entrez_id=216613 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=28584219 | |start=28584219 | ||
| + | |start_of_center_position=28584224 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000109501.1 AK087049 AK087070 | |transcript_name=ENSMUST00000109501.1 AK087049 AK087070 | ||
Revision as of 22:32, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 28584224 |
|---|---|
| End of the center position in the TSS region: | 28584225 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109501.1 AK087049 AK087070 |
|---|---|
| Distance: | -37 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000109501.1:-37 AK087049:-37 AK087070:-37 ENSMUST00000093253.9:-67 ENSMUST00000109502.8:-67 AK045568:-67 ENSMUST00000042534.14:-95 NM_181577:-95 NM_001166661:-95 uc007igk.3:-95 uc007igl.3:-95 uc007igm.2:-95 AK173298:-95 ENSMUST00000146385.8:225 BC066065:474 |
TATA-Box annotation
| Distance to TSS: | 100 |
|---|---|
| Nearest PromoterID: | NM_001166661 |
| Entrez ID: | 216613 |
| Nearest Unigene: | Mm.93759 |
| Nearest Refseq: | NM_181577 |
| Nearest Ensembl: | ENSMUSG00000032878 |
| Gene Name: | coiled-coil domain containing 85A |
| Gene Alias: | - |
| Gene Description: | coiled-coil domain containing 85A |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
