Difference between revisions of "TSS:Mm 101413.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000093253.9:0 ENSMUST00000109502.8:0 ENSMUST00000109501.1:0 AK045568:0 AK087049:0 AK087070:0 ENSMUST00000042534.14:-15 NM_181577:-15 NM_0011666...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
|end=28584309 | |end=28584309 | ||
| + | |end_of_center_position=28584285 | ||
|entrez_id=216613 | |entrez_id=216613 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=28584260 | |start=28584260 | ||
| + | |start_of_center_position=28584284 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000093253.9 ENSMUST00000109502.8 ENSMUST00000109501.1 AK045568 AK087049 AK087070 | |transcript_name=ENSMUST00000093253.9 ENSMUST00000109502.8 ENSMUST00000109501.1 AK045568 AK087049 AK087070 | ||
Revision as of 22:32, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 28584284 |
|---|---|
| End of the center position in the TSS region: | 28584285 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000093253.9 ENSMUST00000109502.8 ENSMUST00000109501.1 AK045568 AK087049 AK087070 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000093253.9:0 ENSMUST00000109502.8:0 ENSMUST00000109501.1:0 AK045568:0 AK087049:0 AK087070:0 ENSMUST00000042534.14:-15 NM_181577:-15 NM_001166661:-15 uc007igk.3:-15 uc007igl.3:-15 uc007igm.2:-15 AK173298:-15 ENSMUST00000146385.8:266 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_001166661 |
| Entrez ID: | 216613 |
| Nearest Unigene: | Mm.93759 |
| Nearest Refseq: | NM_181577 |
| Nearest Ensembl: | ENSMUSG00000032878 |
| Gene Name: | coiled-coil domain containing 85A |
| Gene Alias: | - |
| Gene Description: | coiled-coil domain containing 85A |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
