Difference between revisions of "TSS:Mm 101414.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=uc029rla.1:0 BC059020:0 BC037626:3 BC049150:14 AK083953:-64 |chr=chr11 |cpg_percent=0.08 |distance=0 |distance_to_tss=-165 |end=29172756 |entrez_id=1045...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW557776= | ||
| + | |Ppp4r3b= | ||
|all_trans=uc029rla.1:0 BC059020:0 BC037626:3 BC049150:14 AK083953:-64 | |all_trans=uc029rla.1:0 BC059020:0 BC037626:3 BC049150:14 AK083953:-64 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-165 | |distance_to_tss=-165 | ||
|end=29172756 | |end=29172756 | ||
| + | |end_of_center_position=29172742 | ||
|entrez_id=104570 | |entrez_id=104570 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=AW011752 | + | |gene_alias=AW011752 |
|gene_description="SMEK homolog 2, suppressor of mek1 (Dictyostelium)" | |gene_description="SMEK homolog 2, suppressor of mek1 (Dictyostelium)" | ||
|gene_id=320757 | |gene_id=320757 | ||
| Line 17: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2444673 | |hgnc_mgi_id=MGI:2444673 | ||
| + | |mKIAA1387= | ||
|nearest_ensembl=ENSMUSG00000020463 | |nearest_ensembl=ENSMUSG00000020463 | ||
|nearest_promoter_id=NM_134034 | |nearest_promoter_id=NM_134034 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=29172727 | |start=29172727 | ||
| + | |start_of_center_position=29172741 | ||
|strand=- | |strand=- | ||
|transcript_name=uc029rla.1 BC059020 | |transcript_name=uc029rla.1 BC059020 | ||
Revision as of 22:33, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 29172741 |
|---|---|
| End of the center position in the TSS region: | 29172742 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | uc029rla.1 BC059020 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | uc029rla.1:0 BC059020:0 BC037626:3 BC049150:14 AK083953:-64 |
TATA-Box annotation
| Distance to TSS: | -165 |
|---|---|
| Nearest PromoterID: | NM_134034 |
| Entrez ID: | 104570 |
| Nearest Unigene: | Mm.276386 |
| Nearest Refseq: | NM_134034 |
| Nearest Ensembl: | ENSMUSG00000020463 |
| Gene Name: | RIKEN cDNA A630052C17 gene |
| Gene Alias: | AW011752 |
| Gene Description: | "SMEK homolog 2, suppressor of mek1 (Dictyostelium)" |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
