Difference between revisions of "TSS:Mm 101425.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000102845.10:386 NM_024277:455 NM_001033865:455 uc007ihg.1:455 uc007ihh.1:455 |chr=chr11 |cpg_percent=0.055 |distance=386 |distance_to_tss=-463...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Uba52= | ||
| + | |Ubb= | ||
| + | |Ubc= | ||
|all_trans=ENSMUST00000102845.10:386 NM_024277:455 NM_001033865:455 uc007ihg.1:455 uc007ihh.1:455 | |all_trans=ENSMUST00000102845.10:386 NM_024277:455 NM_001033865:455 uc007ihg.1:455 uc007ihh.1:455 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-463 | |distance_to_tss=-463 | ||
|end=29548512 | |end=29548512 | ||
| + | |end_of_center_position=29548504 | ||
|entrez_id=78294 | |entrez_id=78294 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=0610006J14Rik | + | |gene_alias=0610006J14Rik |
|gene_description=ribosomal protein S27A | |gene_description=ribosomal protein S27A | ||
|gene_id=100042019 | |gene_id=100042019 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=29548494 | |start=29548494 | ||
| + | |start_of_center_position=29548503 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000102845.10 | |transcript_name=ENSMUST00000102845.10 | ||
Revision as of 22:37, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 29548503 |
|---|---|
| End of the center position in the TSS region: | 29548504 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000102845.10 |
|---|---|
| Distance: | 386 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000102845.10:386 NM_024277:455 NM_001033865:455 uc007ihg.1:455 uc007ihh.1:455 |
TATA-Box annotation
| Distance to TSS: | -463 |
|---|---|
| Nearest PromoterID: | NM_001033865 |
| Entrez ID: | 78294 |
| Nearest Unigene: | Mm.180003 |
| Nearest Refseq: | NM_024277 |
| Nearest Ensembl: | ENSMUSG00000020460 |
| Gene Name: | ribosomal protein S27A |
| Gene Alias: | 0610006J14Rik |
| Gene Description: | ribosomal protein S27A |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
