Difference between revisions of "TSS:Mm 160820.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000123881.8:-41 uc007ihp.1:-41 BC024726:-41 |chr=chr11 |cpg_percent=0.025 |distance=-41 |distance_to_tss=45629 |end=29764192 |entrez_id=68585 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA407876= | ||
| + | |AA409940= | ||
| + | |AA960376= | ||
| + | |ASY= | ||
| + | |C130026I10Rik= | ||
| + | |NOGO= | ||
| + | |NSP-CL= | ||
| + | |NgA= | ||
| + | |Nogo-A= | ||
| + | |Nogo-B= | ||
| + | |Nogo-C= | ||
|all_trans=ENSMUST00000123881.8:-41 uc007ihp.1:-41 BC024726:-41 | |all_trans=ENSMUST00000123881.8:-41 uc007ihp.1:-41 BC024726:-41 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 17: | ||
|distance_to_tss=45629 | |distance_to_tss=45629 | ||
|end=29764192 | |end=29764192 | ||
| + | |end_of_center_position=29764192 | ||
|entrez_id=68585 | |entrez_id=68585 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=1110020G17Rik | + | |gene_alias=1110020G17Rik |
|gene_description=reticulon 4 | |gene_description=reticulon 4 | ||
|gene_id=237711 | |gene_id=237711 | ||
| Line 17: | Line 29: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2442895 | |hgnc_mgi_id=MGI:2442895 | ||
| + | |mKIAA0886= | ||
| + | |mKIAA4153= | ||
|nearest_ensembl=ENSMUSG00000020458 | |nearest_ensembl=ENSMUSG00000020458 | ||
|nearest_promoter_id=NM_024226 | |nearest_promoter_id=NM_024226 | ||
| Line 24: | Line 38: | ||
|species=mouse | |species=mouse | ||
|start=29764191 | |start=29764191 | ||
| + | |start_of_center_position=29764191 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000123881.8 uc007ihp.1 BC024726 | |transcript_name=ENSMUST00000123881.8 uc007ihp.1 BC024726 | ||
Revision as of 22:40, 11 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 29764191 |
|---|---|
| End of the center position in the TSS region: | 29764192 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000123881.8 uc007ihp.1 BC024726 |
|---|---|
| Distance: | -41 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000123881.8:-41 uc007ihp.1:-41 BC024726:-41 |
TATA-Box annotation
| Distance to TSS: | 45629 |
|---|---|
| Nearest PromoterID: | NM_024226 |
| Entrez ID: | 68585 |
| Nearest Unigene: | Mm.192580 |
| Nearest Refseq: | NM_024226 |
| Nearest Ensembl: | ENSMUSG00000020458 |
| Gene Name: | echinoderm microtubule associated protein like 6 |
| Gene Alias: | 1110020G17Rik |
| Gene Description: | reticulon 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
