Difference between revisions of "TSS:Mm 101433.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC051653:-36 BC023161:-40 BC059940:-125 AK079934:166 |chr=chr11 |cpg_percent=0 |distance=-36 |distance_to_tss=-74287 |end=30100322 |entrez_id=237711 |gc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C230094A16Rik= | ||
| + | |EMAP-6= | ||
|all_trans=BC051653:-36 BC023161:-40 BC059940:-125 AK079934:166 | |all_trans=BC051653:-36 BC023161:-40 BC059940:-125 AK079934:166 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-74287 | |distance_to_tss=-74287 | ||
|end=30100322 | |end=30100322 | ||
| + | |end_of_center_position=30100321 | ||
|entrez_id=237711 | |entrez_id=237711 | ||
|gc_percent=0.288557 | |gc_percent=0.288557 | ||
| − | |gene_alias=2900083P10Rik | + | |gene_alias=2900083P10Rik |
|gene_description=echinoderm microtubule associated protein like 6 | |gene_description=echinoderm microtubule associated protein like 6 | ||
|gene_id=20742 | |gene_id=20742 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=30100318 | |start=30100318 | ||
| + | |start_of_center_position=30100320 | ||
|strand=- | |strand=- | ||
|transcript_name=BC051653 | |transcript_name=BC051653 | ||
Revision as of 22:41, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 30100320 |
|---|---|
| End of the center position in the TSS region: | 30100321 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC051653 |
|---|---|
| Distance: | -36 |
| Num_trans: | 4 |
| All_trans: | BC051653:-36 BC023161:-40 BC059940:-125 AK079934:166 |
TATA-Box annotation
| Distance to TSS: | -74287 |
|---|---|
| Nearest PromoterID: | NM_146016 |
| Entrez ID: | 237711 |
| Nearest Unigene: | Mm.445271 |
| Nearest Refseq: | NM_146016 |
| Nearest Ensembl: | ENSMUSG00000044072 |
| Gene Name: | "spectrin beta, non-erythrocytic 1" |
| Gene Alias: | 2900083P10Rik |
| Gene Description: | echinoderm microtubule associated protein like 6 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.288557 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
