Difference between revisions of "TSS:Mm 101476.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=13890 |end=30785667 |entrez_id=103554 |gc_percent=0.507463 |gene_alias=AA409398|AU041366|TEMO|mKIAA0077 |...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |AU041366= | ||
| + | |TEMO= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 5: | Line 7: | ||
|distance_to_tss=13890 | |distance_to_tss=13890 | ||
|end=30785667 | |end=30785667 | ||
| + | |end_of_center_position=30785666 | ||
|entrez_id=103554 | |entrez_id=103554 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=AA409398 | + | |gene_alias=AA409398 |
|gene_description="proteasome (prosome, macropain) activator subunit 4" | |gene_description="proteasome (prosome, macropain) activator subunit 4" | ||
|gene_name=Psme4 | |gene_name=Psme4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA0077= | ||
|nearest_ensembl=ENSMUSG00000040850 | |nearest_ensembl=ENSMUSG00000040850 | ||
|nearest_promoter_id=NM_134013 | |nearest_promoter_id=NM_134013 | ||
| Line 18: | Line 22: | ||
|species=mouse | |species=mouse | ||
|start=30785663 | |start=30785663 | ||
| + | |start_of_center_position=30785665 | ||
|strand=- | |strand=- | ||
|tata_box="-38(CACTATAAAAGG,-,0.00)" | |tata_box="-38(CACTATAAAAGG,-,0.00)" | ||
Revision as of 22:46, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 30785665 |
|---|---|
| End of the center position in the TSS region: | 30785666 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 13890 |
|---|---|
| Nearest PromoterID: | NM_134013 |
| Entrez ID: | 103554 |
| Nearest Unigene: | Mm.240066 |
| Nearest Refseq: | NM_134013 |
| Nearest Ensembl: | ENSMUSG00000040850 |
| Gene Name: | Psme4 |
| Gene Alias: | AA409398 |
| Gene Description: | "proteasome (prosome, macropain) activator subunit 4" |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-38(CACTATAAAAGG,-,0.00)" |
