Difference between revisions of "TSS:Mm 101478.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000152770.1:0 ENSMUST00000073192.13:174 BC018468:185 NM_025745:195 uc007iic.1:195 AK133874:195 AK077120:203 AK002471:203 |chr=chr11 |cpg_percen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Asb-3= | ||
|all_trans=ENSMUST00000152770.1:0 ENSMUST00000073192.13:174 BC018468:185 NM_025745:195 uc007iic.1:195 AK133874:195 AK077120:203 AK002471:203 | |all_trans=ENSMUST00000152770.1:0 ENSMUST00000073192.13:174 BC018468:185 NM_025745:195 uc007iic.1:195 AK133874:195 AK077120:203 AK002471:203 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=-39 | |distance_to_tss=-39 | ||
|end=30954393 | |end=30954393 | ||
| + | |end_of_center_position=30954360 | ||
|entrez_id=65257 | |entrez_id=65257 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=2400011J03Rik | + | |gene_alias=2400011J03Rik |
|gene_description=ankyrin repeat and SOCS box-containing 3 | |gene_description=ankyrin repeat and SOCS box-containing 3 | ||
|gene_id=66753 | |gene_id=66753 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=30954325 | |start=30954325 | ||
| + | |start_of_center_position=30954359 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000152770.1 | |transcript_name=ENSMUST00000152770.1 | ||
Revision as of 22:47, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 30954359 |
|---|---|
| End of the center position in the TSS region: | 30954360 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000152770.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000152770.1:0 ENSMUST00000073192.13:174 BC018468:185 NM_025745:195 uc007iic.1:195 AK133874:195 AK077120:203 AK002471:203 |
TATA-Box annotation
| Distance to TSS: | -39 |
|---|---|
| Nearest PromoterID: | NM_023906 |
| Entrez ID: | 65257 |
| Nearest Unigene: | Mm.440539 |
| Nearest Refseq: | NM_023906 |
| Nearest Ensembl: | ENSMUSG00000020305 |
| Gene Name: | endoplasmic reticulum lectin 1 |
| Gene Alias: | 2400011J03Rik |
| Gene Description: | ankyrin repeat and SOCS box-containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
