Difference between revisions of "TSS:Mm 101488.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000020546.2:46 NM_011491:59 uc007iik.1:59 AF031035:59 ENSMUST00000152094.1:73 AF056244:212 BC012206:227 AK010318:245 AK002527:252 |chr=chr11 |c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Stc2l= | ||
|all_trans=ENSMUST00000020546.2:46 NM_011491:59 uc007iik.1:59 AF031035:59 ENSMUST00000152094.1:73 AF056244:212 BC012206:227 AK010318:245 AK002527:252 | |all_trans=ENSMUST00000020546.2:46 NM_011491:59 uc007iik.1:59 AF031035:59 ENSMUST00000152094.1:73 AF056244:212 BC012206:227 AK010318:245 AK002527:252 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-63 | |distance_to_tss=-63 | ||
|end=31370128 | |end=31370128 | ||
| + | |end_of_center_position=31370124 | ||
|entrez_id=20856 | |entrez_id=20856 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=AW125853 | + | |gene_alias=AW125853 |
|gene_description=stanniocalcin 2 | |gene_description=stanniocalcin 2 | ||
|gene_id=20856 | |gene_id=20856 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1316731 | |hgnc_mgi_id=MGI:1316731 | ||
| + | |mustc2= | ||
|nearest_ensembl=ENSMUSG00000020303 | |nearest_ensembl=ENSMUSG00000020303 | ||
|nearest_promoter_id=NM_011491 | |nearest_promoter_id=NM_011491 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=31370119 | |start=31370119 | ||
| + | |start_of_center_position=31370123 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000020546.2 | |transcript_name=ENSMUST00000020546.2 | ||
Revision as of 22:47, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 31370123 |
|---|---|
| End of the center position in the TSS region: | 31370124 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000020546.2 |
|---|---|
| Distance: | 46 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000020546.2:46 NM_011491:59 uc007iik.1:59 AF031035:59 ENSMUST00000152094.1:73 AF056244:212 BC012206:227 AK010318:245 AK002527:252 |
TATA-Box annotation
| Distance to TSS: | -63 |
|---|---|
| Nearest PromoterID: | NM_011491 |
| Entrez ID: | 20856 |
| Nearest Unigene: | Mm.32506 |
| Nearest Refseq: | NM_011491 |
| Nearest Ensembl: | ENSMUSG00000020303 |
| Gene Name: | stanniocalcin 2 |
| Gene Alias: | AW125853 |
| Gene Description: | stanniocalcin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
