Difference between revisions of "TSS:Hg 103570.1"
From referenceTSS
| Line 5: | Line 5: | ||
|distance_to_tss=-5391 | |distance_to_tss=-5391 | ||
|end=4046338 | |end=4046338 | ||
| + | |end_of_center_position=4046336 | ||
|entrez_id=101927964 | |entrez_id=101927964 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=4046332 | |start=4046332 | ||
| + | |start_of_center_position=4046335 | ||
|strand=+ | |strand=+ | ||
|tata_box="-35(GGGTATTTAAGG,-,0.00),38(GTTTTTTAAAGC,-,0.00),39(TTTTTTAAAGCA,+,0.00),54(CCTTTTAGAAAA,+,0.00)" | |tata_box="-35(GGGTATTTAAGG,-,0.00),38(GTTTTTTAAAGC,-,0.00),39(TTTTTTAAAGCA,+,0.00),54(CCTTTTAGAAAA,+,0.00)" | ||
Revision as of 22:55, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 4046335 |
|---|---|
| End of the center position in the TSS region: | 4046336 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -5391 |
|---|---|
| Nearest PromoterID: | NR_120632 |
| Entrez ID: | 101927964 |
| Nearest Unigene: | Hs.737041 |
| Nearest Refseq: | NR_120632 |
| Nearest Ensembl: | ENSG00000236990 |
| Gene Name: | LOC101927964 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101927964 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GGGTATTTAAGG,-,0.00),38(GTTTTTTAAAGC,-,0.00),39(TTTTTTAAAGCA,+,0.00),54(CCTTTTAGAAAA,+,0.00)" |
