Difference between revisions of "TSS:Mm 101516.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK161300:-14 AK015057:-14 NM_027031:-24 uc007ijs.2:-24 BC087911:-24 ENSMUST00000054327.2:-29 AK005716:-29 |chr=chr11 |cpg_percent=0.015 |distance=-14 |d...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |4930403C08Rik= | ||
|all_trans=AK161300:-14 AK015057:-14 NM_027031:-24 uc007ijs.2:-24 BC087911:-24 ENSMUST00000054327.2:-29 AK005716:-29 | |all_trans=AK161300:-14 AK015057:-14 NM_027031:-24 uc007ijs.2:-24 BC087911:-24 ENSMUST00000054327.2:-29 AK005716:-29 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
|end=32527550 | |end=32527550 | ||
| + | |end_of_center_position=32527546 | ||
|entrez_id=69306 | |entrez_id=69306 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=1700007I06Rik | + | |gene_alias=1700007I06Rik |
|gene_description=EF-hand calcium binding domain 9 | |gene_description=EF-hand calcium binding domain 9 | ||
|gene_id=69306 | |gene_id=69306 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=32527541 | |start=32527541 | ||
| + | |start_of_center_position=32527545 | ||
|strand=- | |strand=- | ||
|transcript_name=AK161300 AK015057 | |transcript_name=AK161300 AK015057 | ||
Revision as of 22:56, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 32527545 |
|---|---|
| End of the center position in the TSS region: | 32527546 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK161300 AK015057 |
|---|---|
| Distance: | -14 |
| Num_trans: | 7 |
| All_trans: | AK161300:-14 AK015057:-14 NM_027031:-24 uc007ijs.2:-24 BC087911:-24 ENSMUST00000054327.2:-29 AK005716:-29 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_027031 |
| Entrez ID: | 69306 |
| Nearest Unigene: | Mm.288704 |
| Nearest Refseq: | NM_027031 |
| Nearest Ensembl: | ENSMUSG00000044056 |
| Gene Name: | EF-hand calcium binding domain 9 |
| Gene Alias: | 1700007I06Rik |
| Gene Description: | EF-hand calcium binding domain 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
