Difference between revisions of "TSS:Mm 101518.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.015 |distance= |distance_to_tss=854 |end=32534123 |entrez_id=20868 |gc_percent=0.552239 |gene_alias=Gek1|Lok|mKIAA4026 |gene_description=...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Lok= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=854 | |distance_to_tss=854 | ||
|end=32534123 | |end=32534123 | ||
| + | |end_of_center_position=32534120 | ||
|entrez_id=20868 | |entrez_id=20868 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=Gek1 | + | |gene_alias=Gek1 |
|gene_description=serine/threonine kinase 10 | |gene_description=serine/threonine kinase 10 | ||
|gene_name=Stk10 | |gene_name=Stk10 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA4026= | ||
|nearest_ensembl=ENSMUSG00000020272 | |nearest_ensembl=ENSMUSG00000020272 | ||
|nearest_promoter_id=NM_009288 | |nearest_promoter_id=NM_009288 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=32534116 | |start=32534116 | ||
| + | |start_of_center_position=32534119 | ||
|strand=- | |strand=- | ||
|tata_box="48(GTGTCTATATGG,-,0.00)" | |tata_box="48(GTGTCTATATGG,-,0.00)" | ||
Revision as of 22:57, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 32534119 |
|---|---|
| End of the center position in the TSS region: | 32534120 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 854 |
|---|---|
| Nearest PromoterID: | NM_009288 |
| Entrez ID: | 20868 |
| Nearest Unigene: | Mm.8235 |
| Nearest Refseq: | NM_009288 |
| Nearest Ensembl: | ENSMUSG00000020272 |
| Gene Name: | Stk10 |
| Gene Alias: | Gek1 |
| Gene Description: | serine/threonine kinase 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "48(GTGTCTATATGG,-,0.00)" |
