Difference between revisions of "TSS:Mm 101532.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_019916:-5 uc007ikg.2:-5 AK141870:-5 ENSMUST00000037746.7:-6 BC141308:46 BC145631:46 AJ223801:105 |chr=chr11 |cpg_percent=0.085 |distance=-5 |distance...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Rnx= | ||
| + | |Tlx1l2= | ||
|all_trans=NM_019916:-5 uc007ikg.2:-5 AK141870:-5 ENSMUST00000037746.7:-6 BC141308:46 BC145631:46 AJ223801:105 | |all_trans=NM_019916:-5 uc007ikg.2:-5 AK141870:-5 ENSMUST00000037746.7:-6 BC141308:46 BC145631:46 AJ223801:105 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=15 | |distance_to_tss=15 | ||
|end=33203583 | |end=33203583 | ||
| + | |end_of_center_position=33203574 | ||
|entrez_id=27140 | |entrez_id=27140 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=Hox11l2 | + | |gene_alias=Hox11l2 |
|gene_description="T cell leukemia, homeobox 3" | |gene_description="T cell leukemia, homeobox 3" | ||
|gene_id=27140 | |gene_id=27140 | ||
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|species=mouse | |species=mouse | ||
|start=33203563 | |start=33203563 | ||
| + | |start_of_center_position=33203573 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_019916 uc007ikg.2 AK141870 | |transcript_name=NM_019916 uc007ikg.2 AK141870 | ||
Revision as of 23:00, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 33203573 |
|---|---|
| End of the center position in the TSS region: | 33203574 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_019916 uc007ikg.2 AK141870 |
|---|---|
| Distance: | -5 |
| Num_trans: | 7 |
| All_trans: | NM_019916:-5 uc007ikg.2:-5 AK141870:-5 ENSMUST00000037746.7:-6 BC141308:46 BC145631:46 AJ223801:105 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_019916 |
| Entrez ID: | 27140 |
| Nearest Unigene: | Mm.25362 |
| Nearest Refseq: | NM_019916 |
| Nearest Ensembl: | ENSMUSG00000040610 |
| Gene Name: | "T cell leukemia, homeobox 3" |
| Gene Alias: | Hox11l2 |
| Gene Description: | "T cell leukemia, homeobox 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
